RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 IL36RNQ9UBH0 155 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 RABL2AQ9UBK7 228 aaPredicted RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 TRAPPC2P0DI81 140 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 TRAPPC2BP0DI82 140 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 HIST1H1DP16402 221 aaKnown RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 IDH3GP51553 393 aaPredicted RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 OR8B8Q15620 311 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 ALKBH6Q3KRA9 238 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 CLVS2Q5SYC1 327 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 SLC36A1Q7Z2H8 476 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 PNLDC1Q8NA58 520 aaKnown RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 OR13C8Q8NGS7 320 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 FN3KRPQ9HA64 309 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
PRAME-205ENST00000405655 COPZ2Q9P299 210 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 NBASA2RRP1 2371 aa12.13□□□□□ -0.47
PRAME-205ENST00000405655 NAP1L6A6NFF2 107 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 SDCBPO00560 298 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 SS18L1O75177 396 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 SELEP16581 610 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 GPM6AP51674 278 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 TAS2R19P59542 299 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 TMEM42Q69YG0 159 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 GLDNQ6ZMI3 551 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 FBXW5Q969U6 566 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 ZNF488Q96MN9 340 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 FAAP24Q9BTP7 215 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 MOV10Q9HCE1 1003 aaKnown RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 MFNGO00587 321 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 GEMIN2O14893 280 aaKnown RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 GNG2P59768 71 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 NHLH1Q02575 133 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 MICBQ29980 383 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 FAM214BQ7L5A3 538 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 OR2W3Q7Z3T1 314 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 MUC20Q8N307 709 aaPredicted RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 C15orf40Q8WUR7 153 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 HPSE2Q8WWQ2 592 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 EXTL1Q92935 676 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 WBP1Q96G27 269 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
PRAME-205ENST00000405655 PECRQ9BY49 303 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 IFT46Q9NQC8 304 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 VSIG4Q9Y279 399 aa12.12□□□□□ -0.47
PRAME-205ENST00000405655 OR14I1A6ND48 311 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 OR2AT4A6NND4 320 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 AQP7O14520 342 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SULT1A3P0DMM9 295 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SULT1A4P0DMN0 295 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 RBP2P50120 134 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 CXADRP78310 365 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 PRDX4Q13162 271 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ARFRP1Q13795 201 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 RSU1Q15404 277 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
PRAME-205ENST00000405655 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
PRAME-205ENST00000405655 RTL6Q6ICC9 239 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 TCTE3Q8IZS6 198 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ZNF610Q8N9Z0 462 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SLC30A7Q8NEW0 376 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ABHD17AQ96GS6 310 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 S100A13Q99584 98 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 FBLN5Q9UBX5 448 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ZNF175Q9Y473 711 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SHANK1Q9Y566 2161 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 MELTFP08582 738 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 PI3P19957 117 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ACTBP60709 375 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ACTG1P63261 375 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 FAM89BQ8N5H3 189 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
PRAME-205ENST00000405655 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 SLAMF9Q96A28 289 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
PRAME-205ENST00000405655 ING3Q9NXR8 418 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 FZR1Q9UM11 496 aa12.11□□□□□ -0.47
PRAME-205ENST00000405655 ROS1P08922 2347 aa12.1□□□□□ -0.47
PRAME-205ENST00000405655 ZNF816-ZNF321PA0A0X1KG74 233 aa12.1□□□□□ -0.47
PRAME-205ENST00000405655 G3V3Q6 166 aa12.1□□□□□ -0.47
PRAME-205ENST00000405655 SULT1C2O00338 296 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms