RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LYNP07948 512 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 RAB13P51153 203 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 RPL31P62899 125 aaKnown RBP17.09■□□□□ 0.33
TRAF4-203ENST00000394925 GNG3P63215 75 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 DMRTC1Q5HYR2 192 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 CEP78Q5JTW2 689 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 TMEM200BQ69YZ2 307 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 LHFPL4Q7Z7J7 247 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 C11orf42Q8N5U0 333 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 OR8B12Q8NGG6 310 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 ZNF671Q8TAW3 534 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 CDRT15Q96T59 188 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 OR51V1Q9H2C8 321 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 COL7A1Q02388 2944 aa17.09■□□□□ 0.33
TRAF4-203ENST00000394925 A0A1W2PPH5 198 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 ADARB2-AS1A8MUL3 147 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 THAP5Q7Z6K1 395 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 OR4M1Q8NGD0 313 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 OR5M11Q96RB7 305 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 ELAC2Q9BQ52 826 aaKnown RBP17.08■□□□□ 0.32
TRAF4-203ENST00000394925 TAS2R1Q9NYW7 299 aa17.08■□□□□ 0.32
TRAF4-203ENST00000394925 RFPL4AA6NLU0 287 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 RFPL4AL1F8VTS6 287 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 SELENOFO60613 162 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 PEX14O75381 377 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 CCL3L1P16619 93 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 HAGHLQ6PII5 290 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-203ENST00000394925 CCBE1Q6UXH8 406 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-203ENST00000394925 ZNF782Q6ZMW2 699 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-203ENST00000394925 TMEM219Q86XT9 240 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 PGAM4Q8N0Y7 254 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 DYNAPQ8N1N2 210 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 Q8N2B8 174 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 IQCF1Q8N6M8 205 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 CD177Q8N6Q3 437 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 OR2T27Q8NH04 317 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 OTOSQ8NHW6 89 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 AQP3Q92482 292 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 DGCR6LQ9BY27 220 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 USE1Q9NZ43 259 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 U3KQV3 271 aa17.07■□□□□ 0.32
TRAF4-203ENST00000394925 hCG_1809904A0A1W2PP81 198 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 A0A1W2PPE2 198 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 A0A1W2PR64 198 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 A0A1W2PRV1 198 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 MTRF1O75570 445 aaKnown RBP17.06■□□□□ 0.32
TRAF4-203ENST00000394925 MPIG6BO95866 241 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 PAICSP22234 425 aaKnown RBP17.06■□□□□ 0.32
TRAF4-203ENST00000394925 MAP2K3P46734 347 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 PSMA6P60900 246 aaKnown RBP17.06■□□□□ 0.32
TRAF4-203ENST00000394925 CNN3Q15417 329 aaKnown RBP17.06■□□□□ 0.32
TRAF4-203ENST00000394925 MICAQ29983 383 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 VAX1Q5SQQ9 334 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 CYP2R1Q6VVX0 501 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 ACP7Q6ZNF0 438 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 WIPF2Q8TF74 440 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-203ENST00000394925 ZNF488Q96MN9 340 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 CDCA4Q9BXL8 241 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 VNN3Q9NY84 501 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 RASL12Q9NYN1 266 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 LRP12Q9Y561 859 aa17.06■□□□□ 0.32
TRAF4-203ENST00000394925 FAM90A8PA6NJQ4 464 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 MAGEA2P43356 314 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 CEBPDP49716 269 aaPredicted RBP17.05■□□□□ 0.32
TRAF4-203ENST00000394925 ZNF273Q14593 569 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 ARSJQ5FYB0 599 aaPredicted RBP17.05■□□□□ 0.32
TRAF4-203ENST00000394925 MOB3CQ70IA8 216 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 ZNF454Q8N9F8 522 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 OR5A2Q8NGI9 324 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 TEX47Q8TBZ9 253 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 PRSS22Q9GZN4 317 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 C1orf21Q9H246 121 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 ABCB10Q9NRK6 738 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 KLHDC2Q9Y2U9 406 aa17.05■□□□□ 0.32
TRAF4-203ENST00000394925 A6NDX4 124 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 OR5B21A6NL26 309 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 SLC1A7O00341 560 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 IGLL1P15814 213 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 CD33P20138 364 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 PRDX2P32119 198 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 SMIM21Q3B7S5 101 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 ZNF561Q8N587 486 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 RPS4Y2Q8TD47 263 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 NIPSNAP1Q9BPW8 284 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 WNT10AQ9GZT5 417 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 NIPAL2Q9H841 368 aa17.04■□□□□ 0.32
TRAF4-203ENST00000394925 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRAF4-203ENST00000394925 SAMHD1Q9Y3Z3 626 aaKnown RBP17.04■□□□□ 0.32
TRAF4-203ENST00000394925 A0A1W2PRX2 142 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 H3BN98 237 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 ARG1P05089 322 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 PIPP12273 146 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-203ENST00000394925 FAHP16930 419 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 ATP6V1B2P21281 511 aa17.03■□□□□ 0.32
TRAF4-203ENST00000394925 PLCXD3Q63HM9 321 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms