RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CAPZA1P52907 286 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 IL13RA1P78552 427 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SORDQ00796 357 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 GRK1Q15835 563 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF529Q6P280 563 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 C12orf45Q8N5I9 185 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 CNEP1R1Q8N9A8 125 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 ADAD2Q8NCV1 583 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 OR13C8Q8NGS7 320 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 CCDC107Q8WV48 283 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 C1orf147Q96MC9 270 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 FAAP24Q9BTP7 215 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 GON7Q9BXV9 100 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF552Q9H707 407 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 VSIG4Q9Y279 399 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 OR2AT4A6NND4 320 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 HSPB6O14558 160 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 KNG1P01042 644 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CRYGSP22914 178 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CTSSP25774 331 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 TSC22D1Q15714 1073 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 IGFBP7Q16270 282 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 MICBQ29980 383 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF318Q5VUA4 2279 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 SLC36A1Q7Z2H8 476 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 HAS2Q92819 552 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 IP6K3Q96PC2 410 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 A0A0A6YYH2 397 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF503-AS2A6NEH8 195 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 OR6C6A6NF89 314 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 A6NJ64 397 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 EEF1E1-BLOC1S5C9J1V9 151 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 NME2P1O60361 137 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 PGAM2P15259 253 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CCL1P22362 96 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 NME2P22392 152 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CFPP27918 469 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 RBP2P50120 134 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 DHRS2Q13268 280 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 BEX5Q5H9J7 111 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 PTX4Q96A99 478 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 NTNG2Q96CW9 530 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 PRRT1Q99946 306 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 FLNBO75369 2602 aaKnown RBP9.68□□□□□ -0.86
TCOF1-203ENST00000394269 L7N2F9 121 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 GLI4P10075 376 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CD34P28906 385 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 OTX1P32242 354 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 SLC9A3R2Q15599 337 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 NDUFA5Q16718 116 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 PIGYQ3MUY2 71 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 STEAP2Q8NFT2 490 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 OR5H2Q8NGV7 314 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 OR51F2Q8NH61 342 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 CCDC120Q96HB5 630 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 SLC25A21Q9BQT8 299 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-203ENST00000394269 TMPRSS13Q9BYE2 586 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 EHFQ9NZC4 300 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 SLC7A11Q9UPY5 501 aa9.68□□□□□ -0.86
TCOF1-203ENST00000394269 SPENQ96T58 3664 aaKnown RBP9.67□□□□□ -0.86
TCOF1-203ENST00000394269 IGKV1-27A0A075B6S5 117 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 SLC22A20A6NK97 555 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 F5H5P2 479 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF735P0CB33 412 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 DUSP1P28562 367 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 HIST1H3AP68431 136 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 FAM3AP98173 230 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 PPP1R1AQ13522 171 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 CHRFAM7AQ494W8 412 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 HIST2H3PS2Q5TEC6 136 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 HIST2H3AQ71DI3 136 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 ST8SIA4Q92187 359 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF224Q9NZL3 707 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 PIPOXQ9P0Z9 390 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 GPR160Q9UJ42 338 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 V9GYS6 101 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 C5orf51A6NDU8 294 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 RGS11O94810 467 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 IL5P05113 134 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 RPS27AP62979 156 aaKnown RBP9.67□□□□□ -0.86
TCOF1-203ENST00000394269 PLP2Q04941 152 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 MEF2DQ14814 521 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 RIPPLY2Q5TAB7 128 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 FOXL2NBQ6ZUU3 175 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 SLC25A26Q70HW3 274 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 FBXL14Q8N1E6 418 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 TMEM178AQ8NBL3 297 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 OR56B2PQ8NGI1 322 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 ARL6Q9H0F7 186 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 METTL9Q9H1A3 318 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 PTTG3PQ9NZH4 202 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 SPRR3Q9UBC9 169 aa9.67□□□□□ -0.86
TCOF1-203ENST00000394269 M0R233 179 aa9.66□□□□□ -0.86
TCOF1-203ENST00000394269 GEMIN2O14893 280 aaKnown RBP9.66□□□□□ -0.86
TCOF1-203ENST00000394269 KCNAB3O43448 404 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms