RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 SERPINA2P20848 420 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 KITLGP21583 273 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 LRP11Q86VZ4 500 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 OR8G5Q8NG78 346 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 KCNG3Q8TAE7 436 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 PTX4Q96A99 478 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 DIABLOQ9NR28 239 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 ALDH3B1P43353 468 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 NR4A2P43354 598 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 HAAOP46952 286 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 PDZK1IP1Q13113 114 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 ZNF181Q2M3W8 571 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 BAIAP2L2Q6UXY1 529 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 ADAT1Q9BUB4 502 aaKnown RBP22.92■■□□□ 1.26
MSX1-201ENST00000382723 GHRLQ9UBU3 117 aa22.92■■□□□ 1.26
MSX1-201ENST00000382723 EPG5Q9HCE0 2579 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 CDC14BO60729 498 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 RNASE12Q5GAN4 147 aaKnown RBP22.91■■□□□ 1.26
MSX1-201ENST00000382723 STEAP3Q658P3 488 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 OR2W3Q7Z3T1 314 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 ACBD4Q8NC06 268 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 TMEM171Q8WVE6 324 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 TMEM100Q9NV29 134 aa22.91■■□□□ 1.26
MSX1-201ENST00000382723 XRCC3O43542 346 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 CSF3P09919 207 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 IL7P13232 177 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 TAS2R20P59543 309 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 PITPNAQ00169 270 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 RSU1Q15404 277 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 LYSMD2Q8IV50 215 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 ZNF611Q8N823 705 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 SYT3Q9BQG1 590 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 CST11Q9H112 138 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 METTL9Q9H1A3 318 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 FBLN5Q9UBX5 448 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 METTL21EPA6NDL7 271 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 H0YL77 283 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 ZNF250P15622 560 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 PTH2RP49190 550 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 RPS23P62266 143 aaKnown RBP22.9■■□□□ 1.26
MSX1-201ENST00000382723 SORDQ00796 357 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 TFF3Q07654 80 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 OR8G1Q15617 311 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 SLC25A26Q70HW3 274 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 GCDHQ92947 438 aaPredicted RBP22.9■■□□□ 1.26
MSX1-201ENST00000382723 TMEM59Q9BXS4 323 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 MSL2Q9HCI7 577 aa22.9■■□□□ 1.26
MSX1-201ENST00000382723 TRAV18A0A075B6X5 111 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 OR5B21A6NL26 309 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 PTHLHP12272 177 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 GNG3P63215 75 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 MOGAT2Q3SYC2 334 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 ADAM5Q6NVV9 412 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 ZNF843Q8N446 348 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 OR10AD1Q8NGE0 317 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 OR51F2Q8NH61 342 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 ITLN2Q8WWU7 325 aaPredicted RBP22.89■■□□□ 1.25
MSX1-201ENST00000382723 MICU1Q9BPX6 476 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 RTL8AQ9BWD3 113 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 ESRP2Q9H6T0 727 aaKnown RBP22.89■■□□□ 1.25
MSX1-201ENST00000382723 ATP23Q9Y6H3 246 aa22.89■■□□□ 1.25
MSX1-201ENST00000382723 IGKV1-12A0A0C4DH73 117 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 IGKV1D-12P01611 117 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 HLA-DQB1P01920 261 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 PLPPR2Q96GM1 343 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 NICN1Q9BSH3 213 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 ADGRG4Q8IZF6 3080 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 HEATR1Q9H583 2144 aaKnown RBP22.88■■□□□ 1.25
MSX1-201ENST00000382723 TUBAL3A6NHL2 446 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 HTR3BO95264 441 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 MGMTP16455 207 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 VEGFCP49767 419 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 KLF3P57682 345 aaPredicted RBP22.88■■□□□ 1.25
MSX1-201ENST00000382723 Q6ZR03 302 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 BATF2Q8N1L9 274 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 NUP37Q8NFH4 326 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 LPAR5Q9H1C0 372 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 POU2F3Q9UKI9 436 aa22.88■■□□□ 1.25
MSX1-201ENST00000382723 ZFYVE26Q68DK2 2539 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 A0A1W2PQ09 198 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 MLNRO43193 412 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 CLDN14O95500 239 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 CSTBP04080 98 aaKnown RBP22.87■■□□□ 1.25
MSX1-201ENST00000382723 SELENOIQ9C0D9 397 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 CA10Q9NS85 328 aa22.87■■□□□ 1.25
MSX1-201ENST00000382723 IGHV3-64DA0A0J9YX35 117 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 LINC00854A0A1B0GVQ3 168 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 DGCR2P98153 550 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 NCMAPQ5T1S8 102 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 TRIQKQ629K1 86 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 HAGHLQ6PII5 290 aaPredicted RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 ASCL4Q6XD76 172 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 NOP16Q9Y3C1 178 aaKnown RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 DIDO1Q9BTC0 2240 aaKnown RBP22.86■■□□□ 1.25
MSX1-201ENST00000382723 IGHV3-13P01766 116 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 WDR86Q86TI4 376 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 ZNF573Q86YE8 665 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 PXT1Q8NFP0 134 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 OR51T1Q8NGJ9 327 aa22.86■■□□□ 1.25
MSX1-201ENST00000382723 SLAMF9Q96A28 289 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms