RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 M0QYG6 137 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MSTNO14793 375 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 NR2C1P13056 603 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MGMTP16455 207 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 NRN1LQ496H8 165 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 NSUN5P2Q63ZY6 315 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 GLT8D1Q68CQ7 371 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 LPCAT3Q6P1A2 487 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 FAHD2BQ6P2I3 314 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ST6GALNAC3Q8NDV1 305 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MBD3L2Q8NHZ7 208 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 FAHD2AQ96GK7 314 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 HHLA2Q9UM44 414 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ARHGAP21Q5T5U3 1957 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 OR2AT4A6NND4 320 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF814B7Z6K7 855 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 E9PLN8 166 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 F8VVB4 439 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 F8VWA3 439 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 CNOT4O95628 575 aaKnown RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 HSF1Q00613 529 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 PDCD1Q15116 288 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ALKAL2Q6UX46 152 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 KRT77Q7Z794 578 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 OR52N4Q8NGI2 321 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A32Q9H2D1 315 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 PPA2Q9H2U2 334 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF319Q9P2F9 582 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MCTS1Q9ULC4 181 aaKnown RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 PTPRZ1P23471 2315 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 RAB3DO95716 219 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 TIMP3P35625 211 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 SORDQ00796 357 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 OR10K2Q6IF99 312 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF627Q7L945 461 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 PEG10Q86TG7 708 aaKnown RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM123Q8N131 208 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 OR9K2Q8NGE7 335 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 OR13C3Q8NGS6 347 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 C11orf40Q8WZ69 217 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM230Q96A57 120 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A36Q96CQ1 311 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 Q96M66 194 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 DNTTIP1Q9H147 329 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 DEFB127Q9H1M4 99 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 LDAHQ9H6V9 325 aa6.72□□□□□ -1.33
CDKL5-202ENST00000379996 FRYQ5TBA9 3013 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 MEGF11A6BM72 1044 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM235A6NFC5 223 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 RPL36A-HNRNPH2H7BZ11 118 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 FGF16O43320 207 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 SYNGR4O95473 234 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 RPS2P15880 293 aaKnown RBP6.71□□□□□ -1.33
CDKL5-202ENST00000379996 C4BPBP20851 252 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 RFC3P40938 356 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF84P51523 738 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 IL15RAQ13261 267 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF273Q14593 569 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 ACSF3Q4G176 576 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-202ENST00000379996 PLAC9Q5JTB6 97 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 CLVS2Q5SYC1 327 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 C10orf91Q5T1B1 145 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 C10orf128Q5T292 105 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 OR2A2Q6IF42 318 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A47Q6Q0C1 308 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 LYG2Q86SG7 212 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 FJX1Q86VR8 437 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 HOGA1Q86XE5 327 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 LINC00346Q8IVM7 164 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 UEVLDQ8IX04 471 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 KDM8Q8N371 416 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 C12orf45Q8N5I9 185 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-202ENST00000379996 ZIC4Q8N9L1 334 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 OR4S1Q8NGB4 309 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 STOML3Q8TAV4 291 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 ST8SIA2Q92186 375 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 FOXRED1Q96CU9 486 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-202ENST00000379996 GMPPAQ96IJ6 420 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-202ENST00000379996 LPAR5Q9H1C0 372 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM100Q9NV29 134 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 RAB22AQ9UL26 194 aa6.71□□□□□ -1.33
CDKL5-202ENST00000379996 C9orf170A2RU37 121 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 BCL2L11O43521 198 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 CTRB1P17538 263 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 CTSSP25774 331 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 SFTPDP35247 375 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 ALDH3B1P43353 468 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-202ENST00000379996 SPOCK1Q08629 439 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 RIPPLY2Q5TAB7 128 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 CTRB2Q6GPI1 263 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 C11orf87Q6NUJ2 197 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 ZNF704Q6ZNC4 412 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-202ENST00000379996 C17orf107Q6ZR85 190 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 LHFPL1Q86WI0 220 aa6.71□□□□□ -1.34
CDKL5-202ENST00000379996 STEAP2Q8NFT2 490 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms