RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NIPSNAP3BQ9BS92 247 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 MAGT1Q9H0U3 335 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF701Q9NV72 531 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 MRPL22Q9NWU5 206 aaKnown RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 GTF2A1LQ9UNN4 478 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 MYOFQ9NZM1 2061 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 CLDN34H7C241 214 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 TNFSF14O43557 240 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 YPEL1O60688 119 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 OR6A2O95222 327 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 FUT1P19526 365 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 CCL20P78556 96 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 PRSS8Q16651 343 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 KRTCAP3Q53RY4 240 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF468Q5VIY5 522 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 TOMM20LQ6UXN7 152 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF66Q6ZN08 573 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 CYB561D1Q8N8Q1 229 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZDHHC22Q8N966 263 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 FAM216AQ8WUB2 273 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM234Q8WY98 164 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ZCCHC14Q8WYQ9 949 aaKnown RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 BCL2L2Q92843 193 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 DNAJA3Q96EY1 480 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 OR10C1Q96KK4 312 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 YPEL2Q96QA6 119 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 NMNAT2Q9BZQ4 307 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 NKX2-4Q9H2Z4 354 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 OR52D1Q9H346 318 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 BCL2L10Q9HD36 194 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 PRM3Q9NNZ6 103 aa6.62□□□□□ -1.35
CDKL5-201ENST00000379989 MKKSQ9NPJ1 570 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-201ENST00000379989 REV3LO60673 3130 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 RBFOX3A6NFN3 312 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 AQP7P3A6NL99 342 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 K7EQS6 105 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 M0R296 226 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 GPRIN2O60269 458 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TRAPPC6AO75865 159 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 KLF8O95600 359 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 CYB5AP00167 134 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 SEC11BP0C7V7 166 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 APOBEC1P41238 236 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TAS2R50P59544 299 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 SMIM21Q3B7S5 101 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 SLC22A6Q4U2R8 563 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 IER5LQ5T953 404 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 OPN5Q6U736 354 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 CATSPERDQ86XM0 798 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 MCEMP1Q8IX19 187 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 ZNF679Q8IYX0 411 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 SYS1Q8N2H4 156 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 COX18Q8N8Q8 333 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 LFNGQ8NES3 379 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 OR56A1Q8NGH5 318 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM239Q8WW34 195 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 PINX1Q96BK5 328 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 CHRNA10Q9GZZ6 450 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 PLSCR4Q9NRQ2 329 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TM7SF3Q9NS93 570 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 PRR13Q9NZ81 148 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 OR6C3Q9NZP0 311 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TAAR2Q9P1P5 351 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 KIR2DS5A0A0G2JLQ3 304 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 A0A0G2JNG1 304 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM202A6NGA9 273 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 KIR2DS3K7RE56 304 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 NDUFS4O43181 175 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 MTX2O75431 263 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 PRH1P02810 166 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM225BP0DP42 221 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 HNRNPA2B1P22626 353 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 FCGR2CP31995 323 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 RPL4P36578 427 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 CLDN18P56856 261 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 NANOS3P60323 173 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 S100A10P60903 97 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 RND3P61587 244 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 RANP62826 216 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 C17orf67Q0P5P2 114 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 ENDOGQ14249 297 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 KIR2DS5Q14953 304 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 FAM89BQ8N5H3 189 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM255BQ8WV15 326 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 CABLES2Q9BTV7 478 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 LGR4Q9BXB1 951 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 RYDENQ9NUL5 291 aaKnown RBP6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TMEM242Q9NWH2 141 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 KCNK6Q9Y257 313 aa6.61□□□□□ -1.35
CDKL5-201ENST00000379989 TRAV8-7A0A075B6U6 113 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 TRAV30A0A087WSZ9 112 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 SAP18O00422 153 aaKnown RBP6.6□□□□□ -1.35
CDKL5-201ENST00000379989 LATO43561 262 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 MAS1P04201 325 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 THY1P04216 161 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CEACAM5P06731 702 aa6.6□□□□□ -1.35
CDKL5-201ENST00000379989 CD33P20138 364 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms