RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FHITP49789 147 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 NHLH1Q02575 133 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CELF2-AS1Q8N7Q2 184 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 FAM131CQ96AQ9 280 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 FER1L4A9Z1Z3 1794 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF660Q6AZW8 331 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 LOC107986453A0A1B0GWG9 222 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CD79AP11912 226 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ISLR2Q6UXK2 745 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CA13Q8N1Q1 262 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 UCP1P25874 307 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SLC37A1P57057 533 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 UBE2IP63279 158 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 LINC00470Q9BZP3 86 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 LYL1P12980 280 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 EN2P19622 333 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SLC36A1Q7Z2H8 476 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM68Q96MH6 324 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ADAT1Q9BUB4 502 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 NOSIPQ9Y314 301 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SERTM2A0A1B0GWG4 89 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 LNP1A1A4G5 178 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 K7ERU9 68 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR4A16Q8NH70 328 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR2V2Q96R30 315 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TRAV27A0A087WT01 109 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 C19orf67A6NJJ6 358 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CD5P06127 495 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 INO80CQ6PI98 192 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR8D4Q8NGM9 314 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CORTO00230 105 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TM4SF5O14894 197 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ALOX12BO75342 701 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ALKBH2Q6NS38 261 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR2S2Q9NQN1 319 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR52E5Q8NH55 327 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF296Q8WUU4 475 aaPredicted RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TM2D1Q9BX74 207 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 MRM2Q9UI43 246 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TRAPPC2LQ9UL33 140 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM56-RWDD3S4R434 201 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 FGF16O43320 207 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 DGCR2P98153 550 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 OR52N4Q8NGI2 321 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SAMD10Q9BYL1 202 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CBY3A6NI87 242 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CDRT15L2A8MXV6 281 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 J3KTA2 159 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 C17orf78Q8N4C9 275 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 PGLYRP3Q96LB9 341 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 JMJD7P0C870 316 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 PEX11GQ96HA9 241 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 MAP1LC3B2A6NCE7 125 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 SERPINA2P20848 420 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 PRSS36Q5K4E3 855 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 MAP1LC3BQ9GZQ8 125 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 PLEKHA3Q9HB20 300 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 CHST2Q9Y4C5 530 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 NAA60Q9H7X0 242 aa4.39□□□□□ -1.71
PCDH9-201ENST00000377861 RCC2Q9P258 522 aaKnown RBP4.39□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1W2PN81 502 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 TNFRSF1AP19438 455 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CHRNA7P36544 502 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PIGPP57054 158 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 OR1F12Q8NHA8 337 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF845Q96IR2 970 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF732B4DXR9 585 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ETFDHQ16134 617 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 F5H5K5 113 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 SOCS6O14544 535 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 C10orf128Q5T292 105 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 AMIGO3Q86WK7 504 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 MYH11P35749 1972 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 AKAP11Q9UKA4 1901 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 FGF17O60258 216 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 OR5G3P0C626 314 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 GLIPR1P48060 266 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 KRTCAP3Q53RY4 240 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CLDN23Q96B33 292 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LIPT2A6NK58 231 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PITX3O75364 302 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 KIAA0141Q14154 515 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 SHEQ5VZ18 495 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LAIR2Q6ISS4 152 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 AGMATQ9BSE5 352 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PRDM14Q9GZV8 571 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM222Q9H0R3 208 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CSN1S1P47710 185 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms