RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 RTP5Q14D33 572 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 PMS2CLQ68D20 193 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 LYG2Q86SG7 212 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 A0A1W2PQF6 199 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 ADAM20O43506 726 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 PRRX1P54821 245 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 OR5H6Q8NGV6 325 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
GPC6-201ENST00000377047 TUBAL3A6NHL2 446 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 KRASP01116 189 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 BMI1P35226 326 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 GLCCI1Q86VQ1 547 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 C2orf50Q96LR7 162 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 FCGR3BO75015 233 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 MOSPD3O75425 235 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
GPC6-201ENST00000377047 CDK5Q00535 292 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 OR5D13Q8NGL4 314 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 MOGAT1Q96PD6 335 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 ZNF416Q9BWM5 594 aa12.13□□□□□ -0.47
GPC6-201ENST00000377047 AMMECR1Q9Y4X0 333 aaPredicted RBP12.13□□□□□ -0.47
GPC6-201ENST00000377047 CCL21O00585 134 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 RPL7L1Q6DKI1 246 aaKnown RBP12.12□□□□□ -0.47
GPC6-201ENST00000377047 UBE3DQ7Z6J8 389 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 ASB10Q8WXI3 467 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 KLK11Q9UBX7 282 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 CCL3P10147 92 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 SPINK2P20155 84 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 PRSS12P56730 875 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 OR2F1Q13607 317 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 EXOSC2Q13868 293 aaKnown RBP12.12□□□□□ -0.47
GPC6-201ENST00000377047 MRGPREQ86SM8 312 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 YIPF6Q96EC8 236 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 SFTPCP11686 197 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 COX5AP20674 150 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 LIMK1P53667 647 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 V9GYS6 101 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 H3BP45 60 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 MBP02144 154 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 PMP22Q01453 160 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 TMEM229BQ8NBD8 167 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 LHX4Q969G2 390 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 ARHGAP5-AS1Q96IT6 56 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 hADV38S2A0JD32 116 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 PTGFRP43088 359 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 DHRS9Q9BPW9 319 aa12.12□□□□□ -0.47
GPC6-201ENST00000377047 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 SULT1A3P0DMM9 295 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 SULT1A4P0DMN0 295 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 DCAF10Q5QP82 559 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 ADGRG7Q96K78 797 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 LRRC3BQ96PB8 259 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 SIRT3Q9NTG7 399 aaPredicted RBP12.11□□□□□ -0.47
GPC6-201ENST00000377047 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 IGHV4-34P06331 123 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 FAAP24Q9BTP7 215 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 UCK1Q9HA47 277 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 SIRT5Q9NXA8 310 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TSTD3H0UI37 97 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 UCNP55089 124 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 Q3ZCU0 254 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TIGITQ495A1 244 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TMEM65Q6PI78 240 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 HIST2H3AQ71DI3 136 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 NECAP1Q8NC96 275 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 OR2M7Q8NG81 312 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 IL5P05113 134 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 OR8B3Q8NGG8 313 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 OR8B2Q96RD0 313 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 HRKO00198 91 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
GPC6-201ENST00000377047 HRASP01112 189 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 GABRB1P18505 474 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 MDH2P40926 338 aaKnown RBP12.11□□□□□ -0.47
GPC6-201ENST00000377047 OPRK1P41145 380 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 CD226Q15762 336 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 ISXQ2M1V0 245 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 MOB1BQ7L9L4 216 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 LILRB4Q8NHJ6 448 aa12.11□□□□□ -0.47
GPC6-201ENST00000377047 MBD1Q9UIS9 605 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms