RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MMP25Q9NPA2 562 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 SRPK3Q9UPE1 567 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 EMC9Q9Y3B6 208 aa11.4□□□□□ -0.58
PRPF4-201ENST00000374198 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.59
PRPF4-201ENST00000374198 NRG2O14511 850 aaPredicted RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ATXN7O15265 892 aaPredicted RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 CSTAP01040 98 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 AMY2BP19961 511 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 MDKP21741 143 aaPredicted RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 HSD11B1P28845 292 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 OR3A2P47893 321 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 CCR4P51679 360 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 FZD2Q14332 565 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF141Q15928 474 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SLC25A26Q70HW3 274 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SLC16A14Q7RTX9 510 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 CACUL1Q86Y37 369 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 PRSS58Q8IYP2 241 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ZCCHC10Q8TBK6 192 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 FGGYQ96C11 551 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 C14orf166Q9Y224 244 aaKnown RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 OR1A2Q9Y585 309 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 A0A0A6YYD4 124 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 A8MVM7 634 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 TMEM14DPA8MWL7 114 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 B3GALT2O43825 422 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 NSA2O95478 260 aaKnown RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ISG15P05161 165 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 CMPK1P30085 196 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 PSG6Q00889 435 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 COL10A1Q03692 680 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ZNF506Q5JVG8 444 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 NOXO1Q8NFA2 376 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ABHD14AQ9BUJ0 271 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 CCL26Q9Y258 94 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 FANCMQ8IYD8 2048 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 DHRS7CA6NNS2 312 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 XKRYO14609 159 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SRSF10O75494 262 aaKnown RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 OR6A2O95222 327 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 HIST1H1DP16402 221 aaKnown RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ZP2Q05996 745 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 FOXF1Q12946 379 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SHISA5Q8N114 240 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 OR10A7Q8NGE5 316 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 OR52R1Q8NGF1 315 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 TAAR8Q969N4 342 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ARRDC3Q96B67 414 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 DNAJA3Q96EY1 480 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 HIST1H2AAQ96QV6 131 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 LPAR5Q9H1C0 372 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 MRPL22Q9NWU5 206 aaKnown RBP11.39□□□□□ -0.59
PRPF4-201ENST00000374198 SEMA5BQ9P283 1151 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 FBLN5Q9UBX5 448 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 R4GMQ9 66 aa11.39□□□□□ -0.59
PRPF4-201ENST00000374198 ARID1AO14497 2285 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 OBSL1O75147 1896 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 SOCS1O15524 211 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CRTAPO75718 401 aaPredicted RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 RAD51DO75771 328 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CST2P09228 141 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 FGF5P12034 268 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 RAB38P57729 211 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 HSF1Q00613 529 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 ENPP2Q13822 863 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 GALNTL5Q7Z4T8 443 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 MRPL52Q86TS9 123 aaKnown RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 HOXB13Q92826 284 aaPredicted RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 IRF7Q92985 503 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CCNL2Q96S94 520 aaPredicted RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CABLES2Q9BTV7 478 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 G6PC2Q9NQR9 355 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 KIR2DL5BA0A0G2JN68 375 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 KIR2DL5BA0A0G2JPC4 375 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 XRCC2O43543 280 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CDC14BO60729 498 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 CYB5R3P00387 301 aaPredicted RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 SLC35G6P0C7Q6 338 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 NKAIN1Q4KMZ8 207 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 C1orf140Q5VVS0 124 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 ADAMTSL4Q6UY14 1074 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 ERN2Q76MJ5 926 aaKnown RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 TCEAL8Q8IYN2 117 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 KIR2DL5AQ8N109 375 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 ZFP62Q8NB50 900 aaPredicted RBP11.38□□□□□ -0.59
PRPF4-201ENST00000374198 OR2G3Q8NGZ4 309 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 GAL3ST4Q96RP7 486 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 SLC46A2Q9BY10 475 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 EHFQ9NZC4 300 aa11.38□□□□□ -0.59
PRPF4-201ENST00000374198 PADI1Q9ULC6 663 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms