RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MYH15Q9Y2K3 1946 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 PPIHO43447 177 aaKnown RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 SFT2D2O95562 160 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 EPPINO95925 133 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 PRSS36Q5K4E3 855 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 KIAA1958Q8N8K9 716 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 BCL7CQ8WUZ0 217 aaPredicted RBP10.32□□□□□ -0.76
VCL-202ENST00000372755 PIK3IP1Q96FE7 263 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 OR2A5Q96R48 311 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 RASL12Q9NYN1 266 aa10.32□□□□□ -0.76
VCL-202ENST00000372755 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 ADAM20O43506 726 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 NDUFB6O95139 128 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 GYPAP02724 150 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 GALP22466 123 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 GALR1P47211 349 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 PGFP49763 221 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 KISS1Q15726 138 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 LYPD8Q6UX82 237 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 VASH2Q86V25 355 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 GLCCI1Q86VQ1 547 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 OR6S1Q8NH40 331 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 ZNF596Q8TC21 504 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 LAMB4A4D0S4 1761 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 AKR7A2O43488 359 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 SCAND1P57086 179 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 NHLH1Q02575 133 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 NHLH2Q02577 135 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 MIDNQ504T8 468 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 TOLLIPQ9H0E2 274 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 PLA2G3Q9NZ20 509 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 PSG11Q9UQ72 335 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 CBY3A6NI87 242 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 RHOBP62745 196 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 RPEL1Q2QD12 228 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 MRGPREQ86SM8 312 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 CLRN3Q8NCR9 226 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 MAFAQ8NHW3 353 aaPredicted RBP10.31□□□□□ -0.76
VCL-202ENST00000372755 FGF14Q92915 247 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 CYSLTR2Q9NS75 346 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 IL20Q9NYY1 176 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 NAT8BQ9UHF3 227 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 CYB5R1Q9UHQ9 305 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 ERRFI1Q9UJM3 462 aaPredicted RBP10.31□□□□□ -0.76
VCL-202ENST00000372755 NWD2Q9ULI1 1742 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 C3orf85A0A1B0GTC6 90 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 TMEM272A0A1B0GTI8 110 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 TBX19O60806 448 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 MT-CO3P00414 261 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 GABRG2P18507 467 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 G0S2P27469 103 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 AVPR2P30518 371 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 DEGS2Q6QHC5 323 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 TMEM108Q6UXF1 575 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 RNF2Q99496 336 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 PHOX2AO14813 284 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 SCO1O75880 301 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 SP1P08047 785 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 CA6P23280 308 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
VCL-202ENST00000372755 ZNF707Q96C28 371 aaPredicted RBP10.31□□□□□ -0.76
VCL-202ENST00000372755 CYR61O00622 381 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 TNFAIP6P98066 277 aaPredicted RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 ATP6V1FQ16864 119 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 JMJD6Q6NYC1 403 aaPredicted RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 TMEM65Q6PI78 240 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TEX261Q6UWH6 196 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 PRDM7Q9NQW5 492 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TBX21Q9UL17 535 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 U3KQ87 197 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 OR2T8A6NH00 312 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 SDHBP21912 280 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 SRP14P37108 136 aaKnown RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 PTGFRP43088 359 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 WDR38Q5JTN6 314 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 OR4C5Q8NGB2 326 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ARHGAP5-AS1Q96IT6 56 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 C12orf57Q99622 126 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 SIGLEC7Q9Y286 467 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 POMT1Q9Y6A1 747 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 N4BP2Q86UW6 1770 aaPredicted RBP10.3□□□□□ -0.76
VCL-202ENST00000372755 LINC01565O15544 149 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ZP3P21754 424 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TMEM88Q6PEY1 159 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ANKRD37Q7Z713 158 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 ATP5SQ99766 215 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 IL21Q9HBE4 155 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 IL36GQ9NZH8 169 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 TRAPPC4Q9Y296 219 aa10.3□□□□□ -0.76
VCL-202ENST00000372755 KCNE3Q9Y6H6 103 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms