RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OR1N2Q8NGR9 330 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 VAX2Q9UIW0 290 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 RPS4Y1P22090 263 aaKnown RBP13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CLDN2P57739 230 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 LINC00518Q8N0U6 118 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 DOK5Q9P104 306 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CD207Q9UJ71 328 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 NTSR1P30989 418 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 FAM27D1Q5T7N8 215 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-201ENST00000371817 DUSP13Q9UII6 198 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 FREM3P0C091 2139 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 F5H697 171 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CTBSQ01459 385 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF880Q6PDB4 577 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 RPS16P62249 146 aaKnown RBP13.79□□□□□ -0.2
COL5A1-201ENST00000371817 NAA60Q9H7X0 242 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 ADAM20O43506 726 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 GUCA2AQ02747 115 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 NHLRC1Q6VVB1 395 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 MRPS24Q96EL2 167 aaKnown RBP13.79□□□□□ -0.2
COL5A1-201ENST00000371817 FOXJ3Q9UPW0 622 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 HPXP02790 462 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 TIAM2Q8IVF5 1701 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 FAM221AA4D161 298 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ASCL1P50553 236 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 RIGQ13278 110 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ADIPOQQ15848 244 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 PRSS54Q6PEW0 395 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TAAR2Q9P1P5 351 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 HSF4Q9ULV5 492 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 H3BQ15 152 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 PMCHL1Q16048 86 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 LRRC15Q8TF66 581 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TM4SF18Q96CE8 201 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 DOK1Q99704 481 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 EGLN1Q9GZT9 426 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF785A8K8V0 405 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TBXA2RP21731 343 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 P2RY2P41231 377 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 HSD11B1LQ7Z5J1 315 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 DOLPP1Q86YN1 238 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 OR4F17Q8NGA8 305 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 CLDN23Q96B33 292 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 SH2D2AQ9NP31 389 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 H0YGG7 62 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 WNT11O96014 354 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 SP1P08047 785 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 FAHD1Q6P587 224 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 VASH2Q86V25 355 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TXNIPQ9H3M7 391 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 MED19A0JLT2 244 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-201ENST00000371817 IGHA1P01876 353 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 NKAIN4Q8IVV8 208 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 OR2C3Q8N628 320 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 RBM14Q96PK6 669 aaKnown RBP13.78□□□□□ -0.2
COL5A1-201ENST00000371817 SNURFLB1AK76 121 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 IGHA2P01877 340 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 HLA-GP17693 338 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 ZBTB25P24278 435 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TMEM33P57088 247 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 HNRNPA1L2Q32P51 320 aaKnown RBP13.78□□□□□ -0.2
COL5A1-201ENST00000371817 OR10G4Q8NGN3 311 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 OR10G9Q8NGN4 311 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 OR10G7Q8NGN6 311 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 RGPD1P0DJD0 1748 aa13.78□□□□□ -0.2
COL5A1-201ENST00000371817 TGIF2-C20orf24A0A0A6YYL0 155 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 OR5AS1Q8N127 324 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 APOOQ9BUR5 198 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 TMEM147Q9BVK8 224 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 OOEPA6NGQ2 149 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 M0R135 149 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 GP1BAP07359 652 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 CD46P15529 392 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 LINC00469Q8N7U9 141 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 NUP37Q8NFH4 326 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF799Q96GE5 643 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 C20orf141Q9NUB4 165 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 SLC17A2O00624 439 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 SSR4P51571 173 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 PARM1Q6UWI2 310 aa13.77□□□□□ -0.2
COL5A1-201ENST00000371817 CPEB3Q8NE35 698 aaKnown RBP13.77□□□□□ -0.2
COL5A1-201ENST00000371817 NCOR1O75376 2440 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 EPHA2P29317 976 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 BMI1P35226 326 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 ZNF628Q5EBL2 1059 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 Q6ZSR6 202 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 OSR2Q8N2R0 312 aa13.77□□□□□ -0.21
COL5A1-201ENST00000371817 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms