RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ACHEP22303 614 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CRYGSP22914 178 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OPRM1P35372 400 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RIDAP52758 137 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMBIM6P55061 237 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SUMO2P61956 95 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 RPS11P62280 158 aaKnown RBP eCLIP3.06□□□□□ -1.92
MCF2-202ENST00000370573 LSM3P62310 102 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 GALK2Q01415 458 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 FABP5Q01469 135 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SCN1BQ07699 218 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RIPPLY1Q0D2K3 151 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GPR50Q13585 617 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RAB35Q15286 201 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 HSPB2Q16082 182 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 EIF2S3LQ2VIR3 472 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 CNPY1Q3B7I2 92 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CCDC58Q4VC31 144 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PABPC1L2AQ5JQF8 200 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 WDR38Q5JTN6 314 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ELFN2Q5R3F8 820 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RPL22L1Q6P5R6 122 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 TEX38Q6PEX7 206 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CD200R1LQ6Q8B3 271 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 STAC2Q6ZMT1 411 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 Q6ZWC4 215 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ABHD12BQ7Z5M8 362 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 LUZP2Q86TE4 346 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 HAPLN4Q86UW8 402 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 P2RY8Q86VZ1 359 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 LURAP1LQ8IV03 231 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 CADM3Q8N126 398 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 SPERTQ8NA61 448 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 RELL2Q8NC24 303 aaPredicted RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR10AC1Q8NH08 325 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 OR1F12Q8NHA8 337 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 GHSRQ92847 366 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 UFD1Q92890 307 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 C12orf43Q96C57 262 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 ISOC1Q96CN7 298 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 MRPL48Q96GC5 212 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 BOD1Q96IK1 185 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 C4orf45Q96LM5 186 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 DOK1Q99704 481 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 TMED9Q9BVK6 235 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PPIL3Q9H2H8 161 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 DDX28Q9NUL7 540 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 FAM206AQ9NX38 181 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 PLEK2Q9NYT0 353 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 LSM4Q9Y4Z0 139 aaKnown RBP3.06□□□□□ -1.92
MCF2-202ENST00000370573 R4GMQ9 66 aa3.06□□□□□ -1.92
MCF2-202ENST00000370573 ESPL1Q14674 2120 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 HIVEP3Q5T1R4 2406 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TRGV11A0A075B6L2 103 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TRBV2A0A0J9YWF9 115 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TMEM269A0A1B0GVZ9 245 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TRDV1A0A1B0GX56 115 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CIB4A0PJX0 185 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CCDC160A6NGH7 325 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF878C9JN71 531 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 F5H5K5 113 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 H3BSH0 61 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC22A1O15245 554 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 AIREO43918 545 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SC5DO75845 299 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GABARAPO95166 117 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 FARS2O95363 451 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC2A1P11166 492 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CD79AP11912 226 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 BMP5P22003 454 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 OTX1P32242 354 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 DCTDP32321 178 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 UQCRFS1P47985 274 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 CX3CR1P49238 355 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 GDI2P50395 445 aaKnown RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 PCBD1P61457 104 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 VBP1P61758 197 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 NCS1P62166 190 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 FAM27E3Q08E93 113 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SCRN3Q0VDG4 424 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 P2RY6Q15077 328 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TAF13Q15543 124 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ODF4Q2M2E3 257 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SLC36A2Q495M3 483 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 TMEM211Q6ICI0 200 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 UNQ9370/PRO34162Q6UXP9 181 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 RHOUQ7L0Q8 258 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 BHLHA15Q7RTS1 189 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 MDP1Q86V88 176 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 MYPOPQ86VE0 399 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF584Q8IVC4 421 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 NHLRC2Q8NBF2 726 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ZNF420Q8TAQ5 688 aaPredicted RBP3.05□□□□□ -1.92
MCF2-202ENST00000370573 NDNFQ8TB73 568 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 RND1Q92730 232 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 ORAI1Q96D31 301 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 SMIM19Q96E16 107 aa3.05□□□□□ -1.92
MCF2-202ENST00000370573 MED30Q96HR3 178 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms