RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 DMRTC1Q5HYR2 192 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 CEP78Q5JTW2 689 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 C11orf42Q8N5U0 333 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 IQCF1Q8N6M8 205 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 OR5K1Q8NHB7 308 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 OTOSQ8NHW6 89 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 ZNF671Q8TAW3 534 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 FAM81AQ8TBF8 368 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 SERTAD4Q9NUC0 356 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 ZNF446Q9NWS9 450 aa17.1■□□□□ 0.33
CD47-202ENST00000361309 AURKAIP1Q9NWT8 199 aaPredicted RBP17.1■□□□□ 0.33
CD47-202ENST00000361309 SELENOFO60613 162 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 COX7A1P24310 79 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 LGALS4P56470 323 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 PSMA6P60900 246 aaKnown RBP17.09■□□□□ 0.33
CD47-202ENST00000361309 RPL31P62899 125 aaKnown RBP17.09■□□□□ 0.33
CD47-202ENST00000361309 CEACAM21Q3KPI0 293 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 TMEM200BQ69YZ2 307 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 THAP5Q7Z6K1 395 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 TEX47Q8TBZ9 253 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 AQP3Q92482 292 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 R3HDM4Q96D70 268 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
CD47-202ENST00000361309 RFPL4AA6NLU0 287 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 RFPL4AL1F8VTS6 287 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 MTRF1O75570 445 aaKnown RBP17.08■□□□□ 0.32
CD47-202ENST00000361309 ATP6V1B2P21281 511 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 MAP2K3P46734 347 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 PLA1AQ53H76 456 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 ZBTB37Q5TC79 503 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 LHFPL4Q7Z7J7 247 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 NDUFA11Q86Y39 141 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 CD177Q8N6Q3 437 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 ZNF454Q8N9F8 522 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 OR4M1Q8NGD0 313 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 PHF21AQ96BD5 680 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 NIPSNAP1Q9BPW8 284 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 RASL12Q9NYN1 266 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 KLHDC2Q9Y2U9 406 aa17.08■□□□□ 0.32
CD47-202ENST00000361309 SAMHD1Q9Y3Z3 626 aaKnown RBP17.08■□□□□ 0.32
CD47-202ENST00000361309 A0A1W2PPH5 198 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 CCL3L1P16619 93 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 RAB13P51153 203 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 HAGHLQ6PII5 290 aaPredicted RBP17.07■□□□□ 0.32
CD47-202ENST00000361309 CCBE1Q6UXH8 406 aaPredicted RBP17.07■□□□□ 0.32
CD47-202ENST00000361309 ACP7Q6ZNF0 438 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 MOB3CQ70IA8 216 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 KRT74Q7RTS7 529 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 DEFB107AQ8IZN7 70 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 DYNAPQ8N1N2 210 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 Q8N2B8 174 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 OR4F17Q8NGA8 305 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 OR4F4Q96R69 305 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 REEP1Q9H902 201 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 USE1Q9NZ43 259 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 LRP12Q9Y561 859 aa17.07■□□□□ 0.32
CD47-202ENST00000361309 ADARB2-AS1A8MUL3 147 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 VGLL3A8MV65 326 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 H3BN98 237 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 PAICSP22234 425 aaKnown RBP17.06■□□□□ 0.32
CD47-202ENST00000361309 OR2T5Q6IEZ7 315 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 PLBD1Q6P4A8 553 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 ZNF782Q6ZMW2 699 aaPredicted RBP17.06■□□□□ 0.32
CD47-202ENST00000361309 OR5A2Q8NGI9 324 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 OR2T29Q8NH02 315 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 OR2T27Q8NH04 317 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 ZNF488Q96MN9 340 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 CITED2Q99967 270 aaPredicted RBP17.06■□□□□ 0.32
CD47-202ENST00000361309 FAM107BQ9H098 131 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 NIPAL2Q9H841 368 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 ACTR3BQ9P1U1 418 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 TCF19Q9Y242 345 aa17.06■□□□□ 0.32
CD47-202ENST00000361309 KMT2CQ8NEZ4 4911 aaKnown RBP17.06■□□□□ 0.32
CD47-202ENST00000361309 hCG_1809904A0A1W2PP81 198 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 A0A1W2PPE2 198 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 A0A1W2PR64 198 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 A0A1W2PRV1 198 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 TCRBV5S2A0A599 114 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 FAM90A8PA6NJQ4 464 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 OR5B21A6NL26 309 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 PRR23D1E9PI22 279 aaPredicted RBP17.05■□□□□ 0.32
CD47-202ENST00000361309 SLC1A7O00341 560 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 PRR23D2P0DMB1 279 aaPredicted RBP17.05■□□□□ 0.32
CD47-202ENST00000361309 PRDX2P32119 198 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 CEBPDP49716 269 aaPredicted RBP17.05■□□□□ 0.32
CD47-202ENST00000361309 ZNF273Q14593 569 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 SMIM21Q3B7S5 101 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 SPATS1Q496A3 300 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 C16orf89Q6UX73 402 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 CD300LDQ6UXZ3 194 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 TMEM219Q86XT9 240 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 ZNF561Q8N587 486 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 POC1AQ8NBT0 407 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 OR10G2Q8NGC3 310 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 WIPF2Q8TF74 440 aaPredicted RBP17.05■□□□□ 0.32
CD47-202ENST00000361309 ARL8BQ9NVJ2 186 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 TAGLN3Q9UI15 199 aa17.05■□□□□ 0.32
CD47-202ENST00000361309 CNN3Q15417 329 aaKnown RBP17.04■□□□□ 0.32
CD47-202ENST00000361309 FOXB2Q5VYV0 432 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms