RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 M0R143 59 aa12.46□□□□□ -0.42
SMC5-201ENST00000361138 OR1D5P58170 312 aa12.46□□□□□ -0.42
SMC5-201ENST00000361138 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.42
SMC5-201ENST00000361138 SOX7Q9BT81 388 aa12.46□□□□□ -0.42
SMC5-201ENST00000361138 OR4C45A6NMZ5 311 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 CST2P09228 141 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 FAM53BQ14153 422 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 SLC24A4Q8NFF2 622 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 PINX1Q96BK5 328 aaKnown RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 LMAN1LQ9HAT1 526 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 FGF21Q9NSA1 209 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 BOKQ9UMX3 212 aaPredicted RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 LIPGQ9Y5X9 500 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 H3BP45 60 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 EPPINO95925 133 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 PGA3P0DJD8 388 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 FOXF1Q12946 379 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 SCGB2A2Q13296 93 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 PRSS53Q2L4Q9 553 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 SPPL3Q8TCT6 385 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 PECRQ9BY49 303 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 VAMP5O95183 116 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 CTSDP07339 412 aaPredicted RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 VAMP3Q15836 100 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 NSUN5P2Q63ZY6 315 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 SIRT7Q9NRC8 400 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 PTP4A3O75365 173 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OPN1MWP04001 364 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OPN1MW2P0DN77 364 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OPN1MW3P0DN78 364 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
SMC5-201ENST00000361138 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 CALHM2Q9HA72 323 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
SMC5-201ENST00000361138 CBY3A6NI87 242 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 B4DEV8 164 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 CTSVO60911 334 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 PNRC1Q12796 327 aaPredicted RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 JMJD6Q6NYC1 403 aaPredicted RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 PRSS41Q7RTY9 318 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 WFDC6Q9BQY6 131 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 MPZL1O95297 269 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 PMP22Q01453 160 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 COX14Q96I36 57 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 MBPP02686 304 aaPredicted RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 RBMXL3Q8N7X1 1067 aaKnown RBP12.44□□□□□ -0.42
SMC5-201ENST00000361138 ABHD5Q8WTS1 349 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 ERGIC1Q969X5 290 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 B3GAT1Q9P2W7 334 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 CLEC18AA5D8T8 446 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 ZNF737O75373 536 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 ZGLP1P0C6A0 271 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 CCKARP32238 428 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 FUT6P51993 359 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 VN1R4Q7Z5H5 301 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 CLEC18CQ8NCF0 446 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 OR2A5Q96R48 311 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
SMC5-201ENST00000361138 CDRT15L2A8MXV6 281 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 ANGPTL7O43827 346 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 YIF1AO95070 293 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 SUMO3P55854 103 aaPredicted RBP12.43□□□□□ -0.42
SMC5-201ENST00000361138 UBE2G2P60604 165 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 ZP1P60852 638 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 BHLHE23Q8NDY6 225 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 OR10AC1Q8NH08 325 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 PQLC2LA1A4F0 135 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 H3BQ15 152 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 PLPP3O14495 311 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 H2BFSP57053 126 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 TGFBR3Q03167 851 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 DUSP2Q05923 314 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 FUT7Q11130 342 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 FAAP24Q9BTP7 215 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 CLCF1Q9UBD9 225 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 PISDQ9UG56 409 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 BCAT2O15382 392 aaPredicted RBP12.43□□□□□ -0.42
SMC5-201ENST00000361138 SPINT2O43291 252 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 CTLA4P16410 223 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 RCC1P18754 421 aaPredicted RBP12.43□□□□□ -0.42
SMC5-201ENST00000361138 RPL29P47914 159 aaKnown RBP12.43□□□□□ -0.42
SMC5-201ENST00000361138 ERVS71-1P61550 626 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 ISXQ2M1V0 245 aa12.43□□□□□ -0.42
SMC5-201ENST00000361138 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
SMC5-201ENST00000361138 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms