RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 K7EQS6 105 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 GPR31O00270 319 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 NQO2P16083 231 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 GPM6AP51674 278 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 ZXDCQ2QGD7 858 aaPredicted RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 ICAM5Q9UMF0 924 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 PTPRFP10586 1907 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 CLEC18AA5D8T8 446 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 TMIGD3P0DMS9 266 aaPredicted RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 NPBWR1P48145 328 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 PPIAP62937 165 aaKnown RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 KLF9Q13886 244 aaPredicted RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 ENDOGQ14249 297 aaKnown RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 CLEC18CQ8NCF0 446 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 FBLIM1Q8WUP2 373 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 LOXL2Q9Y4K0 774 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 A0A1W2PPQ1 181 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 MASP2O00187 686 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 ONECUT2O95948 504 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 PATE4P0C8F1 98 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 LIMK1P53667 647 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 ZNF92Q03936 586 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 FUT7Q11130 342 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
VCP-201ENST00000358901 C12orf10Q9HB07 376 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
VCP-201ENST00000358901 OR5H15A6NDH6 313 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 SPINT1O43278 529 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 CT45A8P0DMV1 189 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 CT45A9P0DMV2 189 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 ZNF32P17041 273 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 GPR12P47775 334 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 DHODHQ02127 395 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 FZD5Q13467 585 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 CT45A2Q5DJT8 189 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 CDC20BQ86Y33 519 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 SFTPA2Q8IWL1 248 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 BSCL2Q96G97 398 aaPredicted RBP12.21□□□□□ -0.45
VCP-201ENST00000358901 HLA-BQ31612 363 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 TRILQ7L0X0 811 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 TSEN54Q7Z6J9 526 aaKnown RBP12.21□□□□□ -0.45
VCP-201ENST00000358901 SLC38A6Q8IZM9 456 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.45
VCP-201ENST00000358901 MMP26Q9NRE1 261 aa12.21□□□□□ -0.45
VCP-201ENST00000358901 AQP7O14520 342 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 CDC14BO60729 498 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 RPL7L1Q6DKI1 246 aaKnown RBP12.21□□□□□ -0.46
VCP-201ENST00000358901 PRSS54Q6PEW0 395 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 CHAC2Q8WUX2 184 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 PRR13Q9NZ81 148 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 CYB5R1Q9UHQ9 305 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.46
VCP-201ENST00000358901 C7orf66A4D0T2 115 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 ZIC2O95409 532 aaPredicted RBP12.21□□□□□ -0.46
VCP-201ENST00000358901 KRASP01116 189 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 PEBP1P30086 187 aaKnown RBP12.21□□□□□ -0.46
VCP-201ENST00000358901 MLF1P58340 268 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 PRSS53Q2L4Q9 553 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 GGNBP1Q5YKI7 109 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.46
VCP-201ENST00000358901 SPRED2Q7Z698 418 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 PHYHIPLQ96FC7 376 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 SHARPINQ9H0F6 387 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 NGBQ9NPG2 151 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 FBXL17Q9UF56 701 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 DTX4Q9Y2E6 619 aa12.21□□□□□ -0.46
VCP-201ENST00000358901 COL5A3P25940 1745 aaPredicted RBP12.2□□□□□ -0.46
VCP-201ENST00000358901 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 COX5AP20674 150 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 SCGB2A2Q13296 93 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 RNF212Q495C1 297 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 MRGPREQ86SM8 312 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 APOBEC3DQ96AK3 386 aaPredicted RBP12.2□□□□□ -0.46
VCP-201ENST00000358901 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 SDK2Q58EX2 2172 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 SOCS1O15524 211 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 NANOS3P60323 173 aaKnown RBP12.2□□□□□ -0.46
VCP-201ENST00000358901 RAB35Q15286 201 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 ANKRD37Q7Z713 158 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 PRSS27Q9BQR3 290 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 TNFSF14O43557 240 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 ISXQ2M1V0 245 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 ZPLD1Q8TCW7 415 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 ASB5Q8WWX0 329 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 ERGIC1Q969X5 290 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 RASL12Q9NYN1 266 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 LAMP3Q9UQV4 416 aa12.2□□□□□ -0.46
VCP-201ENST00000358901 EP300Q09472 2414 aaPredicted RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 GREM1O60565 184 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 HNF1AP20823 631 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 ACAA2P42765 397 aaKnown RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 KIR2DL1P43626 348 aaPredicted RBP12.19□□□□□ -0.46
VCP-201ENST00000358901 EFNB2P52799 333 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
VCP-201ENST00000358901 OR8B12Q8NGG6 310 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms