RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TRAT1Q6PIZ9 186 aa8.79□□□□□ -1
CHD3-202ENST00000358181 REC114Q7Z4M0 266 aa8.79□□□□□ -1
CHD3-202ENST00000358181 WFDC5Q8TCV5 224 aa8.79□□□□□ -1
CHD3-202ENST00000358181 HAVCR2Q8TDQ0 301 aa8.79□□□□□ -1
CHD3-202ENST00000358181 TBX15Q96SF7 602 aa8.79□□□□□ -1
CHD3-202ENST00000358181 RNF24Q9Y225 148 aa8.79□□□□□ -1
CHD3-202ENST00000358181 NXPH1P58417 271 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SPATS1Q496A3 300 aa8.79□□□□□ -1
CHD3-202ENST00000358181 TOMM20LQ6UXN7 152 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SLC38A9Q8NBW4 561 aa8.79□□□□□ -1
CHD3-202ENST00000358181 ADPRHL1Q8NDY3 354 aa8.79□□□□□ -1
CHD3-202ENST00000358181 ATG101Q9BSB4 218 aa8.79□□□□□ -1
CHD3-202ENST00000358181 MED19A0JLT2 244 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 CTNSO60931 367 aa8.79□□□□□ -1
CHD3-202ENST00000358181 SNNO75324 88 aaPredicted RBP8.79□□□□□ -1
CHD3-202ENST00000358181 ACSM4P0C7M7 580 aa8.79□□□□□ -1
CHD3-202ENST00000358181 A0A1B0GWA3 101 aa8.78□□□□□ -1
CHD3-202ENST00000358181 K7ERU9 68 aa8.78□□□□□ -1
CHD3-202ENST00000358181 HINT1P49773 126 aaPredicted RBP8.78□□□□□ -1
CHD3-202ENST00000358181 TCL1AP56279 114 aa8.78□□□□□ -1
CHD3-202ENST00000358181 RPL27P61353 136 aaKnown RBP8.78□□□□□ -1
CHD3-202ENST00000358181 HIST1H3AP68431 136 aa8.78□□□□□ -1
CHD3-202ENST00000358181 SLC35B1P78383 322 aa8.78□□□□□ -1
CHD3-202ENST00000358181 RPEL1Q2QD12 228 aa8.78□□□□□ -1
CHD3-202ENST00000358181 C20orf196Q8IYI0 205 aa8.78□□□□□ -1
CHD3-202ENST00000358181 IP6K3Q96PC2 410 aa8.78□□□□□ -1
CHD3-202ENST00000358181 CA10Q9NS85 328 aa8.78□□□□□ -1
CHD3-202ENST00000358181 MED29Q9NX70 200 aa8.78□□□□□ -1
CHD3-202ENST00000358181 TMEM30CPA0ZSE6 113 aa8.78□□□□□ -1
CHD3-202ENST00000358181 IFITM10A6NMD0 228 aa8.78□□□□□ -1
CHD3-202ENST00000358181 PPP1CBP62140 327 aa8.78□□□□□ -1
CHD3-202ENST00000358181 WDR25Q64LD2 544 aaPredicted RBP8.78□□□□□ -1
CHD3-202ENST00000358181 OR2A2Q6IF42 318 aa8.78□□□□□ -1
CHD3-202ENST00000358181 BCORP1Q8N888 145 aa8.78□□□□□ -1
CHD3-202ENST00000358181 SEH1LQ96EE3 360 aa8.78□□□□□ -1
CHD3-202ENST00000358181 C16orf92Q96LL3 132 aa8.78□□□□□ -1
CHD3-202ENST00000358181 C11orf54Q9H0W9 315 aaPredicted RBP8.78□□□□□ -1
CHD3-202ENST00000358181 ST3GAL6Q9Y274 331 aa8.78□□□□□ -1
CHD3-202ENST00000358181 RAXQ9Y2V3 346 aa8.78□□□□□ -1
CHD3-202ENST00000358181 LTBRP36941 435 aa8.78□□□□□ -1
CHD3-202ENST00000358181 MTNR1BP49286 362 aa8.78□□□□□ -1
CHD3-202ENST00000358181 PIGPP57054 158 aa8.78□□□□□ -1
CHD3-202ENST00000358181 OR4P4Q8NGL7 312 aa8.78□□□□□ -1
CHD3-202ENST00000358181 ZNF426Q9BUY5 554 aa8.78□□□□□ -1
CHD3-202ENST00000358181 NPFFR1Q9GZQ6 430 aa8.78□□□□□ -1
CHD3-202ENST00000358181 IL37Q9NZH6 218 aa8.78□□□□□ -1
CHD3-202ENST00000358181 KDM3BQ7LBC6 1761 aa8.78□□□□□ -1
CHD3-202ENST00000358181 NME1P15531 152 aaKnown RBP8.78□□□□□ -1
CHD3-202ENST00000358181 ZNF793Q6ZN11 406 aa8.78□□□□□ -1
CHD3-202ENST00000358181 GDPGP1Q6ZNW5 385 aa8.78□□□□□ -1
CHD3-202ENST00000358181 HTR3DQ70Z44 454 aa8.78□□□□□ -1
CHD3-202ENST00000358181 NUFIP2Q7Z417 695 aaKnown RBP8.78□□□□□ -1
CHD3-202ENST00000358181 ZNF300Q96RE9 604 aaPredicted RBP8.78□□□□□ -1
CHD3-202ENST00000358181 IL17CQ9P0M4 197 aa8.78□□□□□ -1
CHD3-202ENST00000358181 LIM2P55344 173 aa8.78□□□□□ -1
CHD3-202ENST00000358181 ZNF740Q8NDX6 193 aa8.78□□□□□ -1
CHD3-202ENST00000358181 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.78□□□□□ -1
CHD3-202ENST00000358181 DIRC2Q96SL1 478 aa8.78□□□□□ -1
CHD3-202ENST00000358181 A0A1B0GV72 72 aa8.78□□□□□ -1
CHD3-202ENST00000358181 C2CD4DB7Z1M9 353 aa8.78□□□□□ -1
CHD3-202ENST00000358181 B4GALT3O60512 393 aa8.78□□□□□ -1
CHD3-202ENST00000358181 PAPLNO95428 1278 aa8.78□□□□□ -1
CHD3-202ENST00000358181 WNT1P04628 370 aa8.78□□□□□ -1
CHD3-202ENST00000358181 CTXN2P0C2S0 81 aa8.78□□□□□ -1
CHD3-202ENST00000358181 GPR3P46089 330 aa8.78□□□□□ -1
CHD3-202ENST00000358181 BTG2P78543 158 aa8.78□□□□□ -1
CHD3-202ENST00000358181 ZBTB37Q5TC79 503 aa8.78□□□□□ -1
CHD3-202ENST00000358181 VN1R2Q8NFZ6 395 aa8.78□□□□□ -1
CHD3-202ENST00000358181 MRGPRDQ8TDS7 321 aa8.78□□□□□ -1
CHD3-202ENST00000358181 SLC39A13Q96H72 371 aa8.78□□□□□ -1
CHD3-202ENST00000358181 VGLL1Q99990 258 aa8.78□□□□□ -1
CHD3-202ENST00000358181 LHX3Q9UBR4 397 aa8.78□□□□□ -1
CHD3-202ENST00000358181 A0A1W2PN81 502 aa8.77□□□□□ -1
CHD3-202ENST00000358181 CHRNA7P36544 502 aa8.77□□□□□ -1
CHD3-202ENST00000358181 PRNTQ86SH4 94 aa8.77□□□□□ -1
CHD3-202ENST00000358181 ZNF547Q8IVP9 402 aa8.77□□□□□ -1
CHD3-202ENST00000358181 SLC37A2Q8TED4 501 aa8.77□□□□□ -1
CHD3-202ENST00000358181 GABRG3Q99928 467 aa8.77□□□□□ -1
CHD3-202ENST00000358181 ZNF416Q9BWM5 594 aa8.77□□□□□ -1
CHD3-202ENST00000358181 NRXN3Q9Y4C0 1643 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
CHD3-202ENST00000358181 CDS2O95674 445 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 OR4E1P0C645 316 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 REG1BP48304 166 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 FOXK2Q01167 660 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 Q499Y3 187 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 CCSMST1Q4G0I0 132 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 DPY19L2P2Q6ZN68 376 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 MBOAT2Q6ZWT7 520 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 SIAH3Q8IW03 269 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 DERL3Q96Q80 235 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 OR2A14Q96R47 310 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 OR2D2Q9H210 308 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 ZNF487B1APH4 448 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 EML2O95834 649 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 FURINP09958 794 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 ZGLP1P0C6A0 271 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 FAAP20Q6NZ36 180 aa8.77□□□□□ -1.01
CHD3-202ENST00000358181 C5orf46Q6UWT4 87 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms