RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MSMPQ1L6U9 139 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 SLC22A6Q4U2R8 563 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 TMEM69Q5SWH9 247 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 OR8S1Q8NH09 359 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 FAM46BQ96A09 425 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 ADAT1Q9BUB4 502 aaKnown RBP13.33□□□□□ -0.28
CTSA-202ENST00000354880 CST11Q9H112 138 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 ATG5Q9H1Y0 275 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 RABL2AQ9UBK7 228 aaPredicted RBP13.33□□□□□ -0.28
CTSA-202ENST00000354880 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
CTSA-202ENST00000354880 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
CTSA-202ENST00000354880 NOP16Q9Y3C1 178 aaKnown RBP13.33□□□□□ -0.28
CTSA-202ENST00000354880 HCFC1P51610 2035 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 UPK1BO75841 260 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 PLATP00750 562 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 IGHV3-13P01766 116 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 KLF3P57682 345 aaPredicted RBP13.32□□□□□ -0.28
CTSA-202ENST00000354880 PDZK1IP1Q13113 114 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 IZUMO1Q8IYV9 350 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 Q8N402 240 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 TMEM104Q8NE00 496 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 MICU1Q9BPX6 476 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 SLC22A4Q9H015 551 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ELL3Q9HB65 397 aaPredicted RBP13.32□□□□□ -0.28
CTSA-202ENST00000354880 DIABLOQ9NR28 239 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ABCB10Q9NRK6 738 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 METTL21EPA6NDL7 271 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 XRCC3O43542 346 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ANGPTL7O43827 346 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 CDC14BO60729 498 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 CRTAPO75718 401 aaPredicted RBP13.32□□□□□ -0.28
CTSA-202ENST00000354880 C1QL1O75973 258 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 MPIG6BO95866 241 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 HAAOP46952 286 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 PITPNAQ00169 270 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 IFITM3Q01628 133 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 OR8G1Q15617 311 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 NCMAPQ5T1S8 102 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 OR8H2Q8N162 312 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ZNF611Q8N823 705 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 PXT1Q8NFP0 134 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 GAL3ST1Q99999 423 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 RTL8AQ9BWD3 113 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 TMEM59Q9BXS4 323 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 METTL9Q9H1A3 318 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 CA10Q9NS85 328 aa13.32□□□□□ -0.28
CTSA-202ENST00000354880 ZNF462Q96JM2 2506 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 IGLV3-9A0A075B6K5 115 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 A0A1W2PP11 408 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 KDM4BO94953 1096 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 SERPINA2P20848 420 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 SELENOVP59797 346 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 RSU1Q15404 277 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 BAK1Q16611 211 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 ZNF181Q2M3W8 571 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 ADAM5Q6NVV9 412 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 CDH24Q86UP0 819 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 ZNF573Q86YE8 665 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
CTSA-202ENST00000354880 OR10K1Q8NGX5 313 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 OR51F2Q8NH61 342 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 PLPPR2Q96GM1 343 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 BANF2Q9H503 90 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 C14orf119Q9NWQ9 140 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 POU2F3Q9UKI9 436 aa13.31□□□□□ -0.28
CTSA-202ENST00000354880 A0A0A6YYH2 397 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.3□□□□□ -0.28
CTSA-202ENST00000354880 A6NJ64 397 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 ZNF780AO75290 641 aaPredicted RBP13.3□□□□□ -0.28
CTSA-202ENST00000354880 MNDAP41218 407 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 PTH2RP49190 550 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 TAS2R20P59543 309 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 GPR176Q14439 515 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 Q6ZR03 302 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 SLC25A26Q70HW3 274 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 OR13G1Q8NGZ3 307 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 ATP23Q9Y6H3 246 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 ICE1Q9Y2F5 2266 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 ROS1P08922 2347 aa13.3□□□□□ -0.28
CTSA-202ENST00000354880 IGKV1-12A0A0C4DH73 117 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.29□□□□□ -0.28
CTSA-202ENST00000354880 H0YL77 283 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 MLNRO43193 412 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 SCGNO76038 276 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 TPPPO94811 219 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 IGKV1D-12P01611 117 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
CTSA-202ENST00000354880 CSTBP04080 98 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms