RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 NPIPB7O75200 414 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF20P17024 532 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 CAMLGP49069 296 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 DAP3P51398 398 aaKnown RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 TMEM33P57088 247 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 IL11RAQ14626 422 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 IAH1Q2TAA2 248 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 Q3ZCU0 254 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ADAM5Q6NVV9 412 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 HEPN1Q6WQI6 88 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 ETV3LQ6ZN32 361 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 MARCH3Q86UD3 253 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 OR13G1Q8NGZ3 307 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 CCDC74BQ96LY2 380 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 EIF5A2Q9GZV4 153 aaKnown RBP13.99□□□□□ -0.17
HMGA1-202ENST00000347617 GSKIPQ9P0R6 139 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 PISDQ9UG56 409 aa13.99□□□□□ -0.17
HMGA1-202ENST00000347617 COL5A1P20908 1838 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-202ENST00000347617 A0A087WWC5 75 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 hCG_1809904A0A1W2PP81 198 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 A0A1W2PR64 198 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 A0A1W2PRV1 198 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 PATE3B3GLJ2 98 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 AHSA1O95433 338 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 DDAH2O95865 285 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 SFTPBP07988 381 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 FGF5P12034 268 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 LMO1P25800 156 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 SLC35A1P78382 337 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 KIAA0141Q14154 515 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-202ENST00000347617 NSDHLQ15738 373 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 FAM24BQ8N5W8 94 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF721Q8TF20 911 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 SLC25A43Q8WUT9 341 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-202ENST00000347617 YPEL4Q96NS1 127 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 OR6C1Q96RD1 312 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 TMEM59Q9BXS4 323 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 PNO1Q9NRX1 252 aaKnown RBP13.98□□□□□ -0.17
HMGA1-202ENST00000347617 C19orf12Q9NSK7 152 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 GAR1Q9NY12 217 aaKnown RBP13.98□□□□□ -0.17
HMGA1-202ENST00000347617 AMDHD2Q9Y303 409 aa13.98□□□□□ -0.17
HMGA1-202ENST00000347617 SEC14L6B5MCN3 397 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 TGOLN2O43493 480 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 GPR137BO60478 399 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 CDC14BO60729 498 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 ZNF354AO60765 605 aaPredicted RBP13.97□□□□□ -0.17
HMGA1-202ENST00000347617 OR2C1O95371 312 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 TTRP02766 147 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 P2RY1P47900 373 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 ZFP36L1Q07352 338 aaKnown RBP13.97□□□□□ -0.17
HMGA1-202ENST00000347617 AADACL3Q5VUY0 350 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 RPUSD3Q6P087 351 aaKnown RBP13.97□□□□□ -0.17
HMGA1-202ENST00000347617 COX15Q7KZN9 410 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 STX12Q86Y82 276 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 SGPP2Q8IWX5 399 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 BHLHE23Q8NDY6 225 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 OR13D1Q8NGV5 346 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 SLC25A36Q96CQ1 311 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 IP6K3Q96PC2 410 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 VN1R1Q9GZP7 353 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 CHST5Q9GZS9 411 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 GFOD1Q9NXC2 390 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 PLA2G2EQ9NZK7 142 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 TCFL5Q9UL49 500 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 HDGFL3Q9Y3E1 203 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 DNAH14Q0VDD8 3507 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 SEC16AO15027 2179 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 CACNA1CQ13936 2221 aa13.97□□□□□ -0.17
HMGA1-202ENST00000347617 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 BTBD17A6NE02 478 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 CXorf65A6NEN9 183 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 RRP8O43159 456 aaKnown RBP13.96□□□□□ -0.17
HMGA1-202ENST00000347617 HCRTR2O43614 444 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 LMX1BO60663 402 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 CTSDP07339 412 aaPredicted RBP13.96□□□□□ -0.17
HMGA1-202ENST00000347617 ITGA3P26006 1051 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 AKR1C3P42330 323 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 FOXK1P85037 733 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 ARFRP1Q13795 201 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 GLIPR1L1Q6UWM5 242 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 PPP1R3BQ86XI6 285 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 OR10H5Q8NGA6 315 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 OR1N1Q8NGS0 311 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 CPNE4Q96A23 557 aaPredicted RBP13.96□□□□□ -0.17
HMGA1-202ENST00000347617 ADIPOR1Q96A54 375 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 ISOC2Q96AB3 205 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 FOXN4Q96NZ1 517 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 PBOV1Q9GZY1 135 aa13.96□□□□□ -0.17
HMGA1-202ENST00000347617 ALG1L2C9J202 215 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 SCRG1O75711 98 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 MPIG6BO95866 241 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 ACP1P24666 158 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 GPX4P36969 197 aaPredicted RBP13.96□□□□□ -0.18
HMGA1-202ENST00000347617 CSNK2A1P68400 391 aaPredicted RBP13.96□□□□□ -0.18
HMGA1-202ENST00000347617 LBHQ53QV2 105 aaPredicted RBP13.96□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF385CQ66K41 422 aaPredicted RBP13.96□□□□□ -0.18
HMGA1-202ENST00000347617 OR2A2Q6IF42 318 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 GRINAQ7Z429 371 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 FAM89BQ8N5H3 189 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms