RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 C11orf53Q8IXP5 236 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 NKAIN3Q8N8D7 197 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 ITLN1Q8WWA0 313 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC25A28Q96A46 364 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 MEGF10Q96KG7 1140 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 OR51I2Q9H344 312 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 KCNK15Q9H427 330 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 LAMP3Q9UQV4 416 aa16.11■□□□□ 0.17
CHMP4A-201ENST00000347519 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 IFITM5A6NNB3 132 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 MAGEB3O15480 346 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 ADH4P08319 380 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 SNRPD2P62316 118 aaKnown RBP16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF154Q13106 437 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 P2RY14Q15391 338 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 MPPED2Q15777 294 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 FAM76BQ5HYJ3 339 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF787Q6DD87 383 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 TMEM200AQ86VY9 491 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 C14orf79Q96F83 325 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 OR2V2Q96R30 315 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 GPER1Q99527 375 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 DAPK2Q9UIK4 370 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 ZDHHC8Q9ULC8 765 aa16.1■□□□□ 0.17
CHMP4A-201ENST00000347519 IGKV1-12A0A0C4DH73 117 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 SLC17A2O00624 439 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 SPRY1O43609 319 aaPredicted RBP16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 SYNGR1O43759 233 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 ANGPTL7O43827 346 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 IGKV1D-12P01611 117 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 PMELP40967 661 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 HAAOP46952 286 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 POU3F4P49335 361 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 KRTAP10-9P60411 292 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 TNFAIP6P98066 277 aaPredicted RBP16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 IDNKQ5T6J7 187 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 HAGHLQ6PII5 290 aaPredicted RBP16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 ZNF826PQ6ZT77 177 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 CDH26Q8IXH8 852 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 SPERTQ8NA61 448 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 SLIRPQ9GZT3 109 aaKnown RBP16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 LIME1Q9H400 295 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 PLGRKTQ9HBL7 147 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 FAIMQ9NVQ4 179 aa16.09■□□□□ 0.17
CHMP4A-201ENST00000347519 NBPF19A0A087WUL8 3843 aa16.08■□□□□ 0.17
CHMP4A-201ENST00000347519 AIPO00170 330 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 PTBP3O95758 552 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 CD55P08174 381 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 PPOXP50336 477 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 RORCP51449 518 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 PSMD7P51665 324 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 CCL8P80075 99 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 HOXA4Q00056 320 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 PLA2G7Q13093 441 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 RAB11BQ15907 218 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 CRYBG3Q68DQ2 2970 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 TGIF2LYQ8IUE0 185 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 BATF2Q8N1L9 274 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 SCCPDHQ8NBX0 429 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 TNFAIP8L1Q8WVP5 186 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 NRGNQ92686 78 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 MARVELD3Q96A59 401 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 FOXRED1Q96CU9 486 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 C1orf147Q96MC9 270 aaPredicted RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 UQCC2Q9BRT2 126 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 CACNG6Q9BXT2 260 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 NEK6Q9HC98 313 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 UFSP2Q9NUQ7 469 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 C14orf119Q9NWQ9 140 aa16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 CCDC59Q9P031 241 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 NOP16Q9Y3C1 178 aaKnown RBP16.08■□□□□ 0.16
CHMP4A-201ENST00000347519 LRP5LA4QPB2 252 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 TMEM210A6NLX4 147 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 RHBDL1O75783 438 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 PAHP00439 452 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 SNRPBP14678 240 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 CFPP27918 469 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 HTR2CP28335 458 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 PTGFRP43088 359 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 PDZK1IP1Q13113 114 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 OR6M1Q8NGM8 313 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 AQP3Q92482 292 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 ZNF488Q96MN9 340 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 SORCS2Q96PQ0 1159 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 VRK1Q99986 396 aaPredicted RBP16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 TLNRD1Q9H1K6 362 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 MS4A5Q9H3V2 200 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 TREM2Q9NZC2 230 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 IL19Q9UHD0 177 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 STEAP1Q9UHE8 339 aa16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 MRPS28Q9Y2Q9 187 aaKnown RBP16.07■□□□□ 0.16
CHMP4A-201ENST00000347519 DYSFO75923 2080 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 TANC2Q9HCD6 1990 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 CDIPTO14735 213 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 HPXP02790 462 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 TMEM225BP0DP42 221 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 MPZP25189 248 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 CDKN1AP38936 164 aa16.06■□□□□ 0.16
CHMP4A-201ENST00000347519 OR10K2Q6IF99 312 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms