RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 COPS3Q9UNS2 423 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 PIGLQ9Y2B2 252 aa10.23□□□□□ -0.77
SGCA-202ENST00000344627 A0A0U1RQK1 487 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 A0A0U1RQV5 110 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 LOC110117498-PIK3R3F6TDL0 507 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 EBAG9O00559 213 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 FAHP16930 419 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 EEF1B2P24534 225 aaKnown RBP10.22□□□□□ -0.77
SGCA-202ENST00000344627 FASP25445 335 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 TGM4P49221 684 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 CEACAM21Q3KPI0 293 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 C1orf146Q5VVC0 180 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 C11orf88Q6PI97 169 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 ZDHHC13Q8IUH4 622 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 SLC35F2Q8IXU6 374 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 HPSE2Q8WWQ2 592 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 RAB3IPQ96QF0 476 aaPredicted RBP10.22□□□□□ -0.77
SGCA-202ENST00000344627 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 IL4I1Q96RQ9 567 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 FGF23Q9GZV9 251 aaPredicted RBP10.22□□□□□ -0.77
SGCA-202ENST00000344627 C16orf95Q9H693 158 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 NLKQ9UBE8 527 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 ENPP5Q9UJA9 477 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 RNF114Q9Y508 228 aa10.22□□□□□ -0.77
SGCA-202ENST00000344627 PKD1L1Q8TDX9 2849 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 SLC22A31A6NKX4 558 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 OR2AT4A6NND4 320 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ZNF670-ZNF695F2Z2N8 137 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 MAGEB4O15481 346 aaPredicted RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 MTRF1O75570 445 aaKnown RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 RHBDL1O75783 438 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ATP5HO75947 161 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 NRASP01111 189 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 FBP1P09467 338 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ATP6V1B1P15313 513 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 AMY2BP19961 511 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 IER3P46695 156 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 DLX1P56177 255 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 CXCR4P61073 352 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 MFGE8Q08431 387 aaPredicted RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 BNIP1Q12981 228 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 BLMHQ13867 455 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ATP6AP1Q15904 470 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 TAF9Q16594 264 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 DGUOKQ16854 277 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 FAM76BQ5HYJ3 339 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ZNF684Q5T5D7 378 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 BCL2L15Q5TBC7 163 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 ATPAF1Q5TC12 328 aaPredicted RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 HAGHLQ6PII5 290 aaPredicted RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 ZNF322Q6U7Q0 402 aaPredicted RBP10.21□□□□□ -0.77
SGCA-202ENST00000344627 PLEKHG7Q6ZR37 379 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 C1orf122Q6ZSJ8 110 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 LY6G5BQ8NDX9 201 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 TMEM185AQ8NFB2 350 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 OR5A2Q8NGI9 324 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 UBE2FQ969M7 185 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 GAFA1Q96PS6 74 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 TBX5Q99593 518 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 DCTN5Q9BTE1 182 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 OR51I2Q9H344 312 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 AP4S1Q9Y587 144 aa10.21□□□□□ -0.77
SGCA-202ENST00000344627 A6NIN4 97 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 OR5B21A6NL26 309 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ZAR1LA6NP61 321 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 PRR32B1ATL7 298 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 RPP14O95059 124 aaKnown RBP10.2□□□□□ -0.78
SGCA-202ENST00000344627 PAHP00439 452 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 IGHV4-59P01825 116 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ACAA1P09110 424 aaPredicted RBP10.2□□□□□ -0.78
SGCA-202ENST00000344627 PSG2P11465 335 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 EPHA2P29317 976 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 DCTDP32321 178 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 TGFBR2P37173 567 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ROM1Q03395 351 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 KLRD1Q13241 179 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 SLX4IPQ5VYV7 408 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 NXNL2Q5VZ03 156 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ASRGL1Q7L266 308 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 GID4Q8IVV7 300 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 FAM185AQ8N0U4 392 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ZSCAN4Q8NAM6 433 aaPredicted RBP10.2□□□□□ -0.78
SGCA-202ENST00000344627 OR51G2Q8NGK0 314 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 OR5R1Q8NH85 324 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ANGPTL6Q8NI99 470 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 TMEM163Q8TC26 289 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 SEMA6AQ9H2E6 1030 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 ELL3Q9HB65 397 aaPredicted RBP10.2□□□□□ -0.78
SGCA-202ENST00000344627 GPR173Q9NS66 373 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 NUFIP1Q9UHK0 495 aaKnown RBP10.2□□□□□ -0.78
SGCA-202ENST00000344627 OR52A1Q9UKL2 312 aa10.2□□□□□ -0.78
SGCA-202ENST00000344627 MEIOCA2RUB1 952 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 H0YAE9 185 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 H3BSH0 61 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 NPFFO15130 113 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 SIGLEC5O15389 551 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 GPR137BO60478 399 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 CIB2O75838 187 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 DHRS3O75911 302 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms