RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GMFGO60234 142 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 DDAH2O95865 285 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 SOD3P08294 240 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 IL11P20809 199 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 CEACAM6P40199 344 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 TMEM187Q14656 261 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 CHRFAM7AQ494W8 412 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 TANGO2Q6ICL3 276 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
HOXA1-201ENST00000343060 PRR22Q8IZ63 422 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 APCDD1LQ8NCL9 501 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF248Q8NDW4 579 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 SEMA6DQ8NFY4 1073 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 OR5R1Q8NH85 324 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 M1APQ8TC57 530 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 STT3BQ8TCJ2 826 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 TGM7Q96PF1 710 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 GABRG3Q99928 467 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 HIPK2Q9H2X6 1198 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 LANCL2Q9NS86 450 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 PCNX3Q9H6A9 2034 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 PTBP3O95758 552 aaKnown RBP8.49□□□□□ -1.05
HOXA1-201ENST00000343060 NUDT14O95848 222 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 PRH1P02810 166 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF43P17038 809 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 IL12BP29460 328 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 AFF3P51826 1226 aaKnown RBP8.49□□□□□ -1.05
HOXA1-201ENST00000343060 GAMTQ14353 236 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 UBE2V2Q15819 145 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF674Q2M3X9 581 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 HIST2H3PS2Q5TEC6 136 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 SFTPA2Q8IWL1 248 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 OR8B12Q8NGG6 310 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF721Q8TF20 911 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 KIAA1456Q9P272 454 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 MMACHCQ9Y4U1 282 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 HS3ST3B1Q9Y662 390 aa8.49□□□□□ -1.05
HOXA1-201ENST00000343060 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 IGKV3D-11A0A0A0MRZ8 115 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 IGKV1-9A0A0C4DH69 117 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 OR5H15A6NDH6 313 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 RBFOX3A6NFN3 312 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 OR5H1A6NKK0 313 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF878C9JN71 531 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 HEXBP07686 556 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 HNRNPA2B1P22626 353 aaKnown RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 LSM6P62312 80 aaKnown RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 RSU1Q15404 277 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TMEM196Q5HYL7 178 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 LCN10Q6JVE6 187 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 PLXDC2Q6UX71 529 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 CLEC9AQ6UXN8 241 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TTLL10Q6ZVT0 673 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 SLC16A14Q7RTX9 510 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 C12orf76Q8N812 135 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 OR51T1Q8NGJ9 327 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 MFSD8Q8NHS3 518 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 RNASE11Q8TAA1 199 aaKnown RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 FAM213BQ8TBF2 198 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 S100PBPQ96BU1 408 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 C18orf12Q96KH6 178 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 RARRES2Q99969 163 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 PIGQQ9BRB3 760 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF2Q9BSG1 426 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 SOX7Q9BT81 388 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TBL1XR1Q9BZK7 514 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 NELFAQ9H3P2 528 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 PADI1Q9ULC6 663 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 HSF4Q9ULV5 492 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 KCNIP3Q9Y2W7 256 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 LHFPL6Q9Y693 200 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 NSG1A0A0A6YYJ2 146 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF726A6NNF4 738 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TSTD3H0UI37 97 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 H0YIG0 161 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TGOLN2O43493 480 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 HCKP08631 526 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 CD63P08962 238 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TNFRSF4P43489 277 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 GLIPR1P48060 266 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 SPCS3P61009 180 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 YPEL5P62699 121 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 HSF1Q00613 529 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 NOGQ13253 232 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 TMEM182Q6ZP80 229 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 H1FNTQ75WM6 255 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 ABHD12BQ7Z5M8 362 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 MMABQ96EY8 250 aaPredicted RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
HOXA1-201ENST00000343060 MEGF10Q96KG7 1140 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 SUCNR1Q9BXA5 334 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 GPR61Q9BZJ8 451 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms