RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 OR2B8PP59922 312 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 OR52B4Q8NGK2 314 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 RAB1CQ92928 201 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 A0A1W2PPQ1 181 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 TRIM77I1YAP6 450 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 CD3EP07766 207 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 C19orf35Q6ZS72 473 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 UQCC1Q9NVA1 299 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 IGHV1OR15-9A0A0B4J2B8 117 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 F5H697 171 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 LYZL6O75951 148 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 SLC25A5P05141 298 aaKnown RBP13.61□□□□□ -0.23
COL11A2-201ENST00000341947 TGFBR1P36897 503 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 MMP15P51511 669 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 RHOBP62745 196 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
COL11A2-201ENST00000341947 CALHM3Q86XJ0 350 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 MCHR2Q969V1 340 aa13.61□□□□□ -0.23
COL11A2-201ENST00000341947 NRAPQ86VF7 1730 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 A0A1W2PN81 502 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 H3BMH7 237 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 MBTPS2O43462 519 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 EPPINO95925 133 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CHRNA7P36544 502 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 LPAR6P43657 344 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CARFQ8N187 725 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SMIM4Q8WVI0 70 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 UQCC2Q9BRT2 126 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 THYN1Q9P016 225 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 FMODQ06828 376 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 KISS1Q15726 138 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 RELL2Q8NC24 303 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-201ENST00000341947 UCK1Q9HA47 277 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 MS4A18H0YCH9 400 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CDX4O14627 284 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SRD5A2P31213 254 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 MS4A18Q3C1V0 323 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 UBALD1Q8TB05 177 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 DPF1Q92782 380 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 TMEM18Q96B42 140 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 TNFRSF19Q9NS68 423 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CLEC5AQ9NY25 188 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 ICMTO60725 284 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CST7O76096 145 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 HOXC4P09017 264 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-201ENST00000341947 ZNF32P17041 273 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 NXPH1P58417 271 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 TAGLNQ01995 201 aaKnown RBP13.6□□□□□ -0.23
COL11A2-201ENST00000341947 PDCD1Q15116 288 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 CLEC12BQ2HXU8 276 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 Q3ZCU0 254 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 DHRS7BQ6IAN0 325 aaPredicted RBP13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SFTPA2Q8IWL1 248 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SFTPA1Q8IWL2 248 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 TMPRSS11FQ6ZWK6 438 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 MRGPREQ86SM8 312 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SRRQ9GZT4 340 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SLC17A5Q9NRA2 495 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 KLK11Q9UBX7 282 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 SERGEFQ9UGK8 458 aa13.6□□□□□ -0.23
COL11A2-201ENST00000341947 BTAF1O14981 1849 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 OR2M5A3KFT3 312 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 ZNF716A6NP11 495 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 J3QR89 54 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 CYR61O00622 381 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 ONECUT2O95948 504 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 RNF151Q2KHN1 245 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 ZNF528Q3MIS6 628 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 WDR31Q8NA23 367 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 DNAJB12Q9NXW2 375 aaKnown RBP13.59□□□□□ -0.23
COL11A2-201ENST00000341947 GABRA1P14867 456 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 OXA1LQ15070 435 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 ZNF788Q6ZQV5 615 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
COL11A2-201ENST00000341947 NIT2Q9NQR4 276 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.59□□□□□ -0.23
COL11A2-201ENST00000341947 MASP2O00187 686 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 RER1O15258 196 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 PJVKQ0ZLH3 352 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 ERRFI1Q9UJM3 462 aaPredicted RBP13.59□□□□□ -0.23
COL11A2-201ENST00000341947 OR4A8P0C604 315 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 PRICKLE4Q2TBC4 344 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 WDR38Q5JTN6 314 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 C12orf73Q69YU5 71 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 YBX2Q9Y2T7 364 aaKnown RBP13.59□□□□□ -0.23
COL11A2-201ENST00000341947 KRTDAPP60985 99 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 IL36GQ9NZH8 169 aa13.59□□□□□ -0.23
COL11A2-201ENST00000341947 TPPP2P59282 170 aa13.58□□□□□ -0.23
COL11A2-201ENST00000341947 LINC00303Q3SY05 128 aa13.58□□□□□ -0.23
COL11A2-201ENST00000341947 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.23
COL11A2-201ENST00000341947 NAGKQ9UJ70 344 aa13.58□□□□□ -0.23
COL11A2-201ENST00000341947 TOX3O15405 576 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms