RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZNF626Q68DY1 528 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 CMTM3Q96MX0 182 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 IGKV3D-11A0A0A0MRZ8 115 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 GNB3P16520 340 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 OR8B12Q8NGG6 310 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 NXPH3O95157 252 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 IFI6P09912 130 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 ZP4Q12836 540 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 ZDHHC8Q9ULC8 765 aa11.26□□□□□ -0.61
LIN54-201ENST00000340417 APOBEC3AP31941 199 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 CDK5Q00535 292 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 TATDN3Q17R31 274 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 ZXDCQ2QGD7 858 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 SSC4DQ8WTU2 575 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 UGT2A1Q9Y4X1 527 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 STAC2Q6ZMT1 411 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 C17orf82Q86X59 251 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 PINX1Q96BK5 328 aaKnown RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 FOXJ3Q9UPW0 622 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 TMEM210A6NLX4 147 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 FAM157AC9JC47 383 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 M0R1X1 148 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 KLF7O75840 302 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 TOXO94900 526 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 STEAP1BQ6NZ63 245 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 C20orf196Q8IYI0 205 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 SLC35E1Q96K37 410 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 NPTNQ9Y639 398 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 NAT2P11245 290 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 Q6ZT83 130 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 TSPAN9O75954 239 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
LIN54-201ENST00000340417 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
LIN54-201ENST00000340417 TICRRQ7Z2Z1 1910 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 TMEM82A0PJX8 343 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 F5H5P2 479 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 C2orf76Q3KRA6 126 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 NSUN5P2Q63ZY6 315 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 OR4D11Q8NGI4 311 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 OR2V2Q96R30 315 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 ZNF2Q9BSG1 426 aaPredicted RBP11.24□□□□□ -0.61
LIN54-201ENST00000340417 HIF1ANQ9NWT6 349 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 SLC25A10Q9UBX3 287 aaPredicted RBP11.24□□□□□ -0.61
LIN54-201ENST00000340417 ZNF629Q9UEG4 869 aaPredicted RBP11.24□□□□□ -0.61
LIN54-201ENST00000340417 CRYM-AS1A6NIL9 109 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 OR5H1A6NKK0 313 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 BMI1P35226 326 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 PTGFRP43088 359 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 TIMM23BQ5SRD1 257 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 OR10K2Q6IF99 312 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 WDSUB1Q8N9V3 476 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 MRGPRDQ8TDS7 321 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 CTHRC1Q96CG8 243 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 RASL11BQ9BPW5 248 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 SYNGR3O43761 229 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 TMEM11P17152 192 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 RAB7AP51149 207 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 RIPPLY2Q5TAB7 128 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 C12orf73Q69YU5 71 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 FGF20Q9NP95 211 aaPredicted RBP11.24□□□□□ -0.61
LIN54-201ENST00000340417 C12orf4Q9NQ89 552 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 VWA8A3KMH1 1905 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 GDNFP39905 211 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 NAAAQ02083 359 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 SKA3Q8IX90 412 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
LIN54-201ENST00000340417 NFYAP23511 347 aaPredicted RBP11.23□□□□□ -0.61
LIN54-201ENST00000340417 ZBTB25P24278 435 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 OR8H3Q8N146 312 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
LIN54-201ENST00000340417 FAM168AQ92567 244 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 SF3B6Q9Y3B4 125 aaKnown RBP11.23□□□□□ -0.61
LIN54-201ENST00000340417 RP2O75695 350 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 GIFP27352 417 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 ISL1P61371 349 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 PSG4Q00888 419 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 FAM76BQ5HYJ3 339 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 H3BMQ9 156 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 HAND1O96004 215 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 SUCLG1P53597 346 aaKnown RBP11.23□□□□□ -0.61
LIN54-201ENST00000340417 C1RLQ9NZP8 487 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms