RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CATSPERDQ86XM0 798 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 NMNAT2Q9BZQ4 307 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 DEFB127Q9H1M4 99 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 PIPOXQ9P0Z9 390 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ZNF319Q9P2F9 582 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ST3GAL6Q9Y274 331 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 IGLV1-36A0A0B4J1U3 117 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 C5orf49A4QMS7 147 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 LDOC1O95751 146 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 MSR1P21757 451 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 NFYBP25208 207 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 EFNA3P52797 238 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 S100A12P80511 92 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 FLI1Q01543 452 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 GNMTQ14749 295 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 PIGYQ3MUY2 71 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 THEM4Q5T1C6 240 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ABHD17BQ5VST6 288 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ZNF660Q6AZW8 331 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 OPN5Q6U736 354 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 MRPL21Q7Z2W9 205 aaKnown RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 DPPA2Q7Z7J5 298 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ZNF695Q8IW36 515 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 NAXDQ8IW45 347 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 GCNT2Q8N0V5 402 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ASB10Q8WXI3 467 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 SCGB3A2Q96PL1 93 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 NAA11Q9BSU3 229 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 TAF9BQ9HBM6 251 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ZNF629Q9UEG4 869 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 RCL1Q9Y2P8 373 aaKnown RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 MED13Q9UHV7 2174 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 A0A0D9SG52 128 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 LIPT2A6NK58 231 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 RFPL4AA6NLU0 287 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 RFPL4AL1F8VTS6 287 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 DHHO43323 396 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 TSPAN2O60636 221 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 IGKV3-11P04433 115 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ITGB2P05107 769 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ZNF32P17041 273 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 TGIF1Q15583 401 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 CYB5R2Q6BCY4 276 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 VHLLQ6RSH7 139 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 BAP18Q8IXM2 172 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 EXD3Q8N9H8 876 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 GPX8Q8TED1 209 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 PNPLA2Q96AD5 504 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 THOC3Q96J01 351 aaKnown RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 AKR1E2Q96JD6 320 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 HINT2Q9BX68 163 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 PADI1Q9ULC6 663 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ATRXP46100 2492 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 PLSCR5A0PG75 271 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 KRBOX1C9JBD0 128 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 HOXC4P09017 264 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 CPT2P23786 658 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 CLDN15P56746 228 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 SLC35A1P78382 337 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 CLEC18BQ6UXF7 455 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 MAML2Q8IZL2 1156 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 SPEM1Q8N4L4 309 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 NKAIN3Q8N8D7 197 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 OR13C8Q8NGS7 320 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 NKX6-2Q9C056 277 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 ADAM19Q9H013 955 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 COLQQ9Y215 455 aaPredicted RBP7.26□□□□□ -1.25
HPS4-201ENST00000336873 AMDHD2Q9Y303 409 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 BOD1L1Q8NFC6 3051 aa7.26□□□□□ -1.25
HPS4-201ENST00000336873 ANKUB1A6NFN9 424 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 CD63P08962 238 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 CASRP41180 1078 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 PTGFRP43088 359 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 PDZK1IP1Q13113 114 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 GUCA2BQ16661 112 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 PLEKHN1Q494U1 663 aaPredicted RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 DRAM2Q6UX65 266 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 UNQ9370/PRO34162Q6UXP9 181 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 Q6ZRG5 221 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 APCDD1LQ8NCL9 501 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 NOXO1Q8NFA2 376 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 OR6S1Q8NH40 331 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 MVB12AQ96EY5 273 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 WDR13Q9H1Z4 485 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 OR5AC2Q9NZP5 309 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 RNF150Q9ULK6 438 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 NOSIPQ9Y314 301 aaKnown RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 ARHGAP21Q5T5U3 1957 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 THADAQ6YHU6 1953 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 LINC00587B1AMM8 73 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 GEMIN2O14893 280 aaKnown RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 GSTZ1O43708 216 aaPredicted RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 CDC14BO60729 498 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 WDR1O75083 606 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 NDUFS6O75380 124 aaKnown RBP7.25□□□□□ -1.25
HPS4-201ENST00000336873 GRPP07492 148 aa7.25□□□□□ -1.25
HPS4-201ENST00000336873 CNR1P21554 472 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms