RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 HPNP05981 417 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 GLAP06280 429 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
PDGFB-201ENST00000331163 RGS7BPQ6MZT1 257 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-201ENST00000331163 MDP1Q86V88 176 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 RBMXL3Q8N7X1 1067 aaKnown RBP13.86□□□□□ -0.19
PDGFB-201ENST00000331163 REG4Q9BYZ8 158 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF319Q9P2F9 582 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 A0A1W2PP11 408 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF850A8MQ14 1090 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 BET1O15155 118 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 RLN2P04090 185 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 RBPJQ06330 500 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 SLC25A47Q6Q0C1 308 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 UNQ6494/PRO21346Q6UXR6 183 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 FAM214BQ7L5A3 538 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 PGLYRP3Q96LB9 341 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 OR14J1Q9UGF5 321 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 KIF25Q9UIL4 384 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 RHBDD3Q9Y3P4 386 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 AUP1Q9Y679 476 aa13.86□□□□□ -0.19
PDGFB-201ENST00000331163 LOC102725191A0A1B0GVB3 256 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 DISC1C4P0D8 188 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 G3V3Q6 166 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 TERTO14746 1132 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 PTH2RP49190 550 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 MMP15P51511 669 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 C2orf68Q2NKX9 166 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 FBXW9Q5XUX1 488 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 TMEM185AQ8NFB2 350 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 UBALD1Q8TB05 177 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 TSNAXQ99598 290 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 MRPL13Q9BYD1 178 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 SELENOIQ9C0D9 397 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 CHMP1AQ9HD42 196 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 PIN1P1O15428 100 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 CYTIPO60759 359 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 WDR1O75083 606 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 ART1P52961 327 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 RSU1Q15404 277 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 SLC25A53Q5H9E4 307 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 NANOS1Q8WY41 292 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 KCTD12Q96CX2 325 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 USB1Q9BQ65 265 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 TTRP02766 147 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 ERVS71-1P61550 626 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 MRPL49Q13405 166 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 KLF9Q13886 244 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 OR56B2PQ8NGI1 322 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 RGP1Q92546 391 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 MRPS18AQ9NVS2 196 aaKnown RBP13.85□□□□□ -0.19
PDGFB-201ENST00000331163 SLC7A11Q9UPY5 501 aa13.85□□□□□ -0.19
PDGFB-201ENST00000331163 ABCA12Q86UK0 2595 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 A0A0G2JK05 382 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 HTR2CP28335 458 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 BDKRB2P30411 391 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SLC22A25Q6T423 547 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 GLIPR1L1Q6UWM5 242 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 BVESQ8NE79 360 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR10AD1Q8NGE0 317 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR1J1Q8NGS3 322 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SCARB1Q8WTV0 552 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 FAM3DQ96BQ1 224 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SF3B5Q9BWJ5 86 aaKnown RBP13.84□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF471Q9BX82 626 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF98A6NK75 572 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 CCL21O00585 134 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR7C1O76099 320 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-201ENST00000331163 AGTR1P30556 359 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 H3F3AP84243 136 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 TRAM1Q15629 374 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SHEQ5VZ18 495 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR51T1Q8NGJ9 327 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR10S1Q8NGN2 331 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 ST7LQ8TDW4 575 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 RNF133Q8WVZ7 376 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 ZNF649Q9BS31 505 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SH2D2AQ9NP31 389 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 FANCFQ9NPI8 374 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 A0A1W2PNV4 684 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 OR6C65A6NJZ3 312 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 CA6P23280 308 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 PCGF3Q3KNV8 242 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 IGSF11Q5DX21 431 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 DCAF12L2Q5VW00 463 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 SMIM4Q8WVI0 70 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 PLEKHA6Q9Y2H5 1048 aa13.84□□□□□ -0.19
PDGFB-201ENST00000331163 LINC01387J3KSC0 135 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 CBR1P16152 277 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 RAP2BP61225 183 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 GRB2P62993 217 aaKnown RBP13.83□□□□□ -0.2
PDGFB-201ENST00000331163 CLRN3Q8NCR9 226 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 SLC30A7Q8NEW0 376 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 OR1J2Q8NGS2 313 aa13.83□□□□□ -0.2
PDGFB-201ENST00000331163 OR10Z1Q8NGY1 313 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms