RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RBKSQ9H477 322 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 MTHFD2LQ9H903 347 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 TAC3Q9UHF0 121 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 KCNK6Q9Y257 313 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 NUP210LQ5VU65 1888 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 SPTBP11277 2137 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CDC40O60508 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 CD55P08174 381 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 LAMP2P13473 410 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 MMP9P14780 707 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ARR3P36575 388 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ARL6IP1Q15041 203 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 SPRED2Q7Z698 418 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF761Q86XN6 746 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 POC1AQ8NBT0 407 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 NUP43Q8NFH3 380 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OR5L1Q8NGL2 311 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OR2AJ1Q8NGZ0 328 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OR14C36Q8NHC7 312 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 LIPHQ8WWY8 451 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZCCHC14Q8WYQ9 949 aaKnown RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 BCL2L2Q92843 193 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 MS4A6EQ96DS6 147 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 CNRIP1Q96F85 164 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ACY3Q96HD9 319 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 LGR4Q9BXB1 951 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF701Q9NV72 531 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 FITM1A5D6W6 292 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 LYPD3O95274 346 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OPN1MWP04001 364 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 SEC11BP0C7V7 166 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 PET100P0DJ07 73 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OPN1MW2P0DN77 364 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OPN1MW3P0DN78 364 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF708P17019 499 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 CSNK2A2P19784 350 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF41P51814 821 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 HLA-DRB3P79483 266 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 Q499Y3 187 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF550Q7Z398 422 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF584Q8IVC4 421 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM156Q8N614 296 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF738Q8NE65 137 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 LFNGQ8NES3 379 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 OR2V1Q8NHB1 315 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 PFN4Q8NHR9 129 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 MARCH1Q8TCQ1 289 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 KCNE4Q8WWG9 221 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 IL22RA2Q969J5 263 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 FAM3DQ96BQ1 224 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 MS4A10Q96PG2 267 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF700Q9H0M5 742 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 C20orf141Q9NUB4 165 aa10.48□□□□□ -0.73
SHMT2-201ENST00000328923 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-201ENST00000328923 PRR32B1ATL7 298 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 NPIPA2E9PIF3 369 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 TUBG1P23258 451 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 SPOCK1Q08629 439 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF793Q6ZN11 406 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM182Q6ZP80 229 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM25Q86YD3 366 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 GVQW1Q8N7I0 195 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 OR2L2Q8NH16 312 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 LOXL4Q96JB6 756 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 RAB18Q9NP72 206 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 HSPB7Q9UBY9 170 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 SERTAD3Q9UJW9 196 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 MRPS18BQ9Y676 258 aaKnown RBP10.47□□□□□ -0.73
SHMT2-201ENST00000328923 NOTCH4Q99466 2003 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 M0R296 226 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 CSTAP01040 98 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 CFPP27918 469 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 ANKRD55Q3KP44 614 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 TEX43Q6ZNM6 134 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 LINC01555Q8NAE3 123 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 OR10AC1Q8NH08 325 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 DYRK2Q92630 601 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-201ENST00000328923 C2orf50Q96LR7 162 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 GUCD1Q96NT3 240 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 SMDT1Q9H4I9 107 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 PRSS16Q9NQE7 514 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 LAMP3Q9UQV4 416 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 WSB1Q9Y6I7 421 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 CHD9Q3L8U1 2897 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 MYO7AQ13402 2215 aa10.47□□□□□ -0.73
SHMT2-201ENST00000328923 MYO9BQ13459 2157 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 TRAV27A0A087WT01 109 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 A0A1B0GTH9 108 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 A0A1B0GUS0 222 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 FEZF1A0PJY2 475 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 CHRM2P08172 466 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 SLC6A6P31641 620 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms