RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SSSCA1O60232 199 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 ZFP62Q8NB50 900 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-201ENST00000323668 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 FAAP24Q9BTP7 215 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 IGLV1-36A0A0B4J1U3 117 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 RAB27BO00194 218 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 F10P00742 488 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 TTRP02766 147 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 B4GALT1P15291 398 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
TCOF1-201ENST00000323668 TMEM33P57088 247 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 DRAM2Q6UX65 266 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 SLC22A18ASQ8N1D0 253 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 PIPOXQ9P0Z9 390 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 KCNK7Q9Y2U2 307 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 RNF212BA8MTL3 300 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 FAM157BP0CG42 384 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 C1orf100Q5SVJ3 147 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 CADM4Q8NFZ8 388 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 RHBDD1Q8TEB9 315 aa13.07□□□□□ -0.32
TCOF1-201ENST00000323668 LIN37Q96GY3 246 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-201ENST00000323668 MRPL22Q9NWU5 206 aaKnown RBP13.07□□□□□ -0.32
TCOF1-201ENST00000323668 HPP00738 406 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CYB561P49447 251 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 LSRQ86X29 649 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-201ENST00000323668 AKR7LQ8NHP1 331 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 HINT2Q9BX68 163 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 SEC11CQ9BY50 192 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 C19orf12Q9NSK7 152 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 NPIPB9F8W1W9 429 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 ADAM11O75078 769 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CTRB1P17538 263 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 LIMK1P53667 647 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 RNF212Q495C1 297 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FDX2Q6P4F2 183 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 OR10J5Q8NHC4 309 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CBR3O75828 277 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CLDN1O95832 211 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 ZBTB25P24278 435 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 HNF4GQ14541 408 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FRZBQ92765 325 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 PLEKHF2Q9H8W4 249 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 UCK1Q9HA47 277 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 OR6C6A6NF89 314 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FGF2P09038 288 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FUT3P21217 361 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 FUT6P51993 359 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 SNRPEP62304 92 aaKnown RBP13.06□□□□□ -0.32
TCOF1-201ENST00000323668 DCAF12Q5T6F0 453 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 RHBDD2Q6NTF9 364 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 GNRHR2Q96P88 292 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 PISDQ9UG56 409 aa13.06□□□□□ -0.32
TCOF1-201ENST00000323668 TNFSF11O14788 317 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 NAAAQ02083 359 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 EGR4Q05215 589 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 LINC00114Q6XXX2 140 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 OR1F12Q8NHA8 337 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 ALKBH3Q96Q83 286 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 SIT1Q9Y3P8 196 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 A0A1W2PPV4 95 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 A6NCN8 305 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 LYPD3O95274 346 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 IFNA10P01566 189 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 CATR1Q13166 79 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 PECRQ9BY49 303 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 POMT1Q9Y6A1 747 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 A0A1B0GTQ1 180 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 OR5H15A6NDH6 313 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 DSCR4P56555 118 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 NXPH1P58417 271 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 SELENOVP59797 346 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 EFSO43281 561 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 CTSDP07339 412 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 BCKDHBP21953 392 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 IGLV3-21P80748 117 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-201ENST00000323668 C20orf196Q8IYI0 205 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 PLK3Q9H4B4 646 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 AHCTF1Q8WYP5 2266 aa13.05□□□□□ -0.32
TCOF1-201ENST00000323668 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 ZNF705GA8MUZ8 300 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-201ENST00000323668 HS3ST1O14792 307 aa13.04□□□□□ -0.32
TCOF1-201ENST00000323668 TO15178 435 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms