RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DPTQ07507 201 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 STRCQ7RTU9 1775 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC25A5P05141 298 aaKnown RBP15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 GP1BAP07359 652 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 CD99P14209 185 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 FAM24BQ8N5W8 94 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC38A11Q08AI6 406 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 TEX101Q9BY14 249 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 FIGNL2A6NMB9 653 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 CCSMST1Q4G0I0 132 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 HDGFL3Q9Y3E1 203 aa15.19■□□□□ 0.02
SMCHD1-201ENST00000320876 ADAM20O43506 726 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 GSG1Q2KHT4 349 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 NOXO1Q8NFA2 376 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 KIAA1551Q9HCM1 1747 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 ST3GAL2Q16842 350 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 PLA1AQ53H76 456 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 LRRC10Q5BKY1 277 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 IL21Q9HBE4 155 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 A0A096LPE4 126 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 A0A1W2PPZ6 126 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 CCL11P51671 97 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 HERVK_113P61574 105 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 SIRT6Q8N6T7 355 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 FRG2CA6NGY1 282 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 ZNF195O14628 629 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 ONECUT2O95948 504 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 APOBEC3DQ96AK3 386 aaPredicted RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 M0R1B8 84 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 B2MP61769 119 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 YRDCQ86U90 279 aaKnown RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 DUSP18Q8NEJ0 188 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 TAAR3PQ9P1P4 343 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 RBFOX3A6NFN3 312 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 RLN3Q8WXF3 142 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 TMEM9BQ9NQ34 198 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 CHD3Q12873 2000 aaKnown RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 YLPM1P49750 1951 aaKnown RBP15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 HMX2A2RU54 273 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 PPICP45877 212 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 GMLQ99445 158 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 ZNF385DQ9H6B1 395 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 Q9N2K0 584 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 PROCRQ9UNN8 238 aa15.18■□□□□ 0.02
SMCHD1-201ENST00000320876 RRP8O43159 456 aaKnown RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 TTRP02766 147 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 EPHA2P29317 976 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC6A12P48065 614 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 B3GNTL1Q67FW5 361 aaPredicted RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 NAT8Q9UHE5 227 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 FANCMQ8IYD8 2048 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 TMEM272A0A1B0GTI8 110 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 HELTA6NFD8 242 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 FGF9P31371 208 aaPredicted RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 RPS19BP1Q86WX3 136 aaKnown RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 IL22RA2Q969J5 263 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 C9orf170A2RU37 121 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 KRASP01116 189 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 FUT3P21217 361 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 TRAT1Q6PIZ9 186 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 MPC2O95563 127 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 MBPP02686 304 aaPredicted RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 ACSM6Q6P461 480 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 RASL12Q9NYN1 266 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 LOC102724200A0A096LPH7 203 aaPredicted RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 FAM157BP0CG42 384 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 OR1C1Q15619 314 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 RFLNAQ6ZTI6 216 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 SLC37A2Q8TED4 501 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 TINAGL1Q9GZM7 467 aaPredicted RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 ATP23Q9Y6H3 246 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 A0A1W2PN81 502 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 AVPR2P30518 371 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 CHRNA7P36544 502 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 MRM1Q6IN84 353 aaKnown RBP15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 SNX22Q96L94 193 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 SCN5AQ14524 2016 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 K7ESM1 405 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 VMA21Q3ZAQ7 101 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 SCGB1D4Q6XE38 83 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 OTOSQ8NHW6 89 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 WBP2Q969T9 261 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 C20orf141Q9NUB4 165 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 WASHC3Q9Y3C0 194 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 LRP12Q9Y561 859 aa15.17■□□□□ 0.02
SMCHD1-201ENST00000320876 PLXNB2O15031 1838 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 FAM87AP0C7U9 286 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 FAHP16930 419 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 ATF1P18846 271 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 IL13RA2Q14627 380 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 FAM74A3Q4VXF1 159 aa15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 C6orf15Q6UXA7 325 aaPredicted RBP15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 MUC20Q8N307 709 aaPredicted RBP15.16■□□□□ 0.02
SMCHD1-201ENST00000320876 OR2T10Q8NGZ9 312 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms