RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CBX5P45973 191 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 IDH3GP51553 393 aaPredicted RBP15.36■□□□□ 0.05
RAB39A-201ENST00000320578 HLXQ14774 488 aaPredicted RBP15.36■□□□□ 0.05
RAB39A-201ENST00000320578 RSU1Q15404 277 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 CARTPTQ16568 116 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 C3orf36Q3SXR2 165 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 PLAC9Q5JTB6 97 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 SFRP4Q6FHJ7 346 aaPredicted RBP15.36■□□□□ 0.05
RAB39A-201ENST00000320578 CISD2Q8N5K1 135 aaKnown RBP15.36■□□□□ 0.05
RAB39A-201ENST00000320578 RNF170Q96K19 258 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 PAPOLGQ9BWT3 736 aaKnown RBP15.36■□□□□ 0.05
RAB39A-201ENST00000320578 POFUT1Q9H488 388 aa15.36■□□□□ 0.05
RAB39A-201ENST00000320578 LOC400499M0QZD8 3231 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 OR5H1A6NKK0 313 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 ANKRD30BLA7E2S9 258 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 SERPINE3A8MV23 424 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 PRSS44E7EML9 344 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 CCNKO75909 580 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 GNB3P16520 340 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 NAT1P18440 290 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 SERPINA2P20848 420 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 MPZP25189 248 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 LINC00303Q3SY05 128 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 DMRTC1Q5HYR2 192 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 TMEM200AQ86VY9 491 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 NAXEQ8NCW5 288 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 OR6F1Q8NGZ6 308 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 C20orf85Q9H1P6 137 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 ZMAT3Q9HA38 289 aaKnown RBP15.35■□□□□ 0.05
RAB39A-201ENST00000320578 MCUBQ9NWR8 336 aa15.35■□□□□ 0.05
RAB39A-201ENST00000320578 NOP16Q9Y3C1 178 aaKnown RBP15.35■□□□□ 0.05
RAB39A-201ENST00000320578 ZNF736B4DX44 427 aaPredicted RBP15.34■□□□□ 0.05
RAB39A-201ENST00000320578 MSTNO14793 375 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 PEX14O75381 377 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 CSTBP04080 98 aaKnown RBP15.34■□□□□ 0.05
RAB39A-201ENST00000320578 CD3DP04234 171 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 CELA3BP08861 270 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 GLI4P10075 376 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 RAC2P15153 192 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 SELEP16581 610 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 PRSS12P56730 875 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 MEF2DQ14814 521 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 RBMS2Q15434 407 aaKnown RBP15.34■□□□□ 0.05
RAB39A-201ENST00000320578 TRAPPC6BQ86SZ2 158 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 DRAXINQ8NBI3 349 aaPredicted RBP15.34■□□□□ 0.05
RAB39A-201ENST00000320578 MED30Q96HR3 178 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 HIST1H2AAQ96QV6 131 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 OCSTAMPQ9BR26 566 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 GHITMQ9H3K2 345 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 PIGMQ9H3S5 423 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 NPDC1Q9NQX5 325 aaPredicted RBP15.34■□□□□ 0.05
RAB39A-201ENST00000320578 GPR160Q9UJ42 338 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 HSF4Q9ULV5 492 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 KCNK7Q9Y2U2 307 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 GTF3C1Q12789 2109 aa15.34■□□□□ 0.05
RAB39A-201ENST00000320578 TRAV6A0A075B6T7 132 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 OR5B21A6NL26 309 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 RAB3DO95716 219 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 ZNF35P13682 527 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 OPRM1P35372 400 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 UCP2P55851 309 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 GNG2P59768 71 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 PPP1CBP62140 327 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 ZMYND11Q15326 602 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 DOLPP1Q86YN1 238 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 HPSE2Q8WWQ2 592 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 ST8SIA4Q92187 359 aa15.33■□□□□ 0.05
RAB39A-201ENST00000320578 ELL3Q9HB65 397 aaPredicted RBP15.33■□□□□ 0.05
RAB39A-201ENST00000320578 ELF5Q9UKW6 265 aaPredicted RBP15.33■□□□□ 0.05
RAB39A-201ENST00000320578 SSX5O60225 188 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 RAB25P57735 213 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 RRAS2P62070 204 aaPredicted RBP15.33■□□□□ 0.04
RAB39A-201ENST00000320578 CXADRP78310 365 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 CD300CQ08708 224 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 TIMM23BQ5SRD1 257 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 ELP2Q6IA86 826 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 ZNF474Q6S9Z5 364 aaPredicted RBP15.33■□□□□ 0.04
RAB39A-201ENST00000320578 ZNF782Q6ZMW2 699 aaPredicted RBP15.33■□□□□ 0.04
RAB39A-201ENST00000320578 MYPOPQ86VE0 399 aaPredicted RBP15.33■□□□□ 0.04
RAB39A-201ENST00000320578 OR10K1Q8NGX5 313 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 OR5P3Q8WZ94 311 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 ARHGAP5-AS1Q96IT6 56 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 USB1Q9BQ65 265 aaKnown RBP15.33■□□□□ 0.04
RAB39A-201ENST00000320578 SLC2A8Q9NY64 477 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 SLC25A15Q9Y619 301 aa15.33■□□□□ 0.04
RAB39A-201ENST00000320578 FRYQ5TBA9 3013 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 ASPMQ8IZT6 3477 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 A0A0A6YYJ9 748 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 IGKV1-12A0A0C4DH73 117 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 MEIS3P1A6NDR6 274 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A10PA6NDY2 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A18PA6NE21 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A16PA6NEW6 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A20PA6NIJ5 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A8PA6NJQ4 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A7PA6NKC0 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A22PA8MWA6 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A12PA8MX19 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A5PA8MXJ8 464 aa15.32■□□□□ 0.04
RAB39A-201ENST00000320578 FAM90A23PA8MXZ1 464 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms