RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ADGRG7Q96K78 797 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 SCGB3A2Q96PL1 93 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 S100A13Q99584 98 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 NUP50Q9UKX7 468 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 V9GYS6 101 aa12.39□□□□□ -0.43
VRK3-201ENST00000316763 NCKAP5O14513 1909 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 A0A1B0GW55 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L2P0CJ85 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L3P0CJ86 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L4P0CJ87 422 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L5P0CJ88 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L6P0CJ89 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4L7P0CJ90 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 PTGFRP43088 359 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 ALDH3B1P43353 468 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 CLDN15P56746 228 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 ARPC4P59998 168 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 RAC3P60763 192 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
VRK3-201ENST00000316763 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
VRK3-201ENST00000316763 ARFRP1Q13795 201 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 ARL6IP1Q15041 203 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 KISS1Q15726 138 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 VAX1Q5SQQ9 334 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 RNF144BQ7Z419 303 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.38□□□□□ -0.43
VRK3-201ENST00000316763 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 C20orf196Q8IYI0 205 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 OR51T1Q8NGJ9 327 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 TERB2Q8NHR7 220 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 DUX4Q9UBX2 424 aa12.38□□□□□ -0.43
VRK3-201ENST00000316763 FOXD3Q9UJU5 478 aaPredicted RBP12.38□□□□□ -0.43
VRK3-201ENST00000316763 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
VRK3-201ENST00000316763 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 OR2AT4A6NND4 320 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FAM166BA8MTA8 275 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 M0R135 149 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 OR2F2O95006 317 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 DUS4LO95620 317 aaKnown RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 MGMTP16455 207 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 AKR1C4P17516 323 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 M6PRP20645 277 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 VAMP1P23763 118 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 MPGP29372 298 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 PPIAP62937 165 aaKnown RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 MRPS34P82930 218 aaKnown RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 PLGLB1Q02325 96 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 OR2F1Q13607 317 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 PLAC9Q5JTB6 97 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 C11orf87Q6NUJ2 197 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 TMEM17Q86X19 198 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 MRGPRFQ96AM1 343 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ZNF799Q96GE5 643 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 SRXN1Q9BYN0 137 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ACKR4Q9NPB9 350 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ZNF230Q9UIE0 474 aaPredicted RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 NMBP08949 121 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FAM87AP0C7U9 286 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 POU3F2P20265 443 aaPredicted RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 OTX1P32242 354 aaPredicted RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 STARP49675 285 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 TMEM50BP56557 158 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ZNF345Q14585 488 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 MICBQ29980 383 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FAM27BQ5VT28 67 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 RTL6Q6ICC9 239 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 RGS7BPQ6MZT1 257 aaPredicted RBP12.37□□□□□ -0.43
VRK3-201ENST00000316763 IGFL3Q6UXB1 125 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 Q6ZSR3 168 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 PDZD9Q8IXQ8 264 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 OR5H2Q8NGV7 314 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 OR2V1Q8NHB1 315 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ST8SIA4Q92187 359 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FBXW5Q969U6 566 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.37□□□□□ -0.43
VRK3-201ENST00000316763 SDHAF2Q9NX18 166 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
VRK3-201ENST00000316763 FAM25EA8MYX2 175 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 MFNGO00587 321 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 FCGR2AP12318 317 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 ZNF250P15622 560 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 AMY2BP19961 511 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 LHX2P50458 406 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 CARD18P57730 90 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 ZNF660Q6AZW8 331 aaPredicted RBP12.36□□□□□ -0.43
VRK3-201ENST00000316763 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 KCNRGQ8N5I3 272 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 THAP6Q8TBB0 222 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms