RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CST11Q9H112 138 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 RANGRFQ9HD47 186 aaPredicted RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 CRIM1Q9NZV1 1036 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 MRPL15Q9P015 296 aaKnown RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 KCNN3Q9UGI6 736 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 OSGIN2Q9Y236 505 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 FAM215AQ9Y5M1 114 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 CACNA1GO43497 2377 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 SOCS1O15524 211 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 WDR1O75083 606 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TOXO94900 526 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 CD3DP04234 171 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 PAX5Q02548 391 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 FAPQ12884 760 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 PDZK1IP1Q13113 114 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 KRTCAP3Q53RY4 240 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 FAM209AQ5JX71 171 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 Q6ZPA2 131 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 SLC25A42Q86VD7 318 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 OR5A2Q8NGI9 324 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 NANOS1Q8WY41 292 aaKnown RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 STARD4Q96DR4 205 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 ZNF71Q9NQZ8 489 aaPredicted RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TUBD1Q9UJT1 453 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 CLEC4AQ9UMR7 237 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 MPC1Q9Y5U8 109 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 A0A0B4J2A0 478 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TUBAL3A6NHL2 446 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 IQCF6A8MYZ5 107 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TFECO14948 347 aaPredicted RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 NRASP01111 189 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 M6PRP20645 277 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 ERP29P30040 261 aaKnown RBP6.17□□□□□ -1.42
NPHP1-201ENST00000316534 ERVK11-1P61568 191 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 PLXDC2Q6UX71 529 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 SLC7A5P1Q8MH63 180 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 ARRDC1Q8N5I2 433 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 Q8NA96 180 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 RADILQ96JH8 1075 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TMEM59Q9BXS4 323 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 HES4Q9HCC6 221 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 SHPKQ9UHJ6 478 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 GTF2A1LQ9UNN4 478 aa6.17□□□□□ -1.42
NPHP1-201ENST00000316534 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 A6NL46 340 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 PYCARD-AS1I3L0S3 204 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 SMPD2O60906 423 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RGS11O94810 467 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 PATE4P0C8F1 98 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MGMTP16455 207 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 KITLGP21583 273 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 INPP1P49441 399 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RBP2P50120 134 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RAB1AP62820 205 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 SRYQ05066 204 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 IL24Q13007 206 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 SURF2Q15527 256 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MBNL2Q5VZF2 373 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 OR10K2Q6IF99 312 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MYPOPQ86VE0 399 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 ASCC1Q8N9N2 400 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 PNLDC1Q8NA58 520 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 OR2AE1Q8NHA4 323 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 FBXW5Q969U6 566 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 SLC6A7Q99884 636 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 URM1Q9BTM9 101 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 CHST6Q9GZX3 395 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 DLL4Q9NR61 685 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 EDARQ9UNE0 448 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 NOP16Q9Y3C1 178 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 CHD3Q12873 2000 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 NOS1APO75052 506 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 CD8AP01732 235 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 CPT2P23786 658 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 ZBTB25P24278 435 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 AP2S1P53680 142 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 P2RY6Q15077 328 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 FCN2Q15485 313 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RSBN1Q5VWQ0 802 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 SHEQ5VZ18 495 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 LUZP2Q86TE4 346 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MDP1Q86V88 176 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 FYTTD1Q96QD9 318 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 GIPP09681 153 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RPS2P15880 293 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RAD52P43351 418 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MAB21L1Q13394 359 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 ATPAF1Q5TC12 328 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 AADACL3Q5VUY0 350 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 DHRS11Q6UWP2 260 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 OVCH2Q7RTZ1 564 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 TRAPPC6BQ86SZ2 158 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 UXS1Q8NBZ7 420 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 EMG1Q92979 244 aaKnown RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 RAB3CQ96E17 227 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 NKX3-1Q99801 234 aaPredicted RBP6.16□□□□□ -1.42
NPHP1-201ENST00000316534 PRRT1Q99946 306 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 METTL9Q9H1A3 318 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 MGAT4CQ9UBM8 478 aa6.16□□□□□ -1.42
NPHP1-201ENST00000316534 A0A0C4DFX4 3053 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms