RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 SIGLEC5O15389 551 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 DHRS3O75911 302 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 KNG1P01042 644 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 TTRP02766 147 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 FASP25445 335 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 KLRD1Q13241 179 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 BCL2L15Q5TBC7 163 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 C1orf146Q5VVC0 180 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 NXNL2Q5VZ03 156 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 AMIGO2Q86SJ2 522 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 ZDHHC13Q8IUH4 622 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 KIR3DL3Q8N743 410 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 TMEM185AQ8NFB2 350 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 ZNF671Q8TAW3 534 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 TMEM163Q8TC26 289 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 ZNF696Q9H7X3 374 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 BEX1Q9HBH7 125 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 C1RLQ9NZP8 487 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 ZAR1LA6NP61 321 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 MTRF1O75570 445 aaKnown RBP16.04■□□□□ 0.16
LIME1-201ENST00000309546 IGLV3-1P01715 115 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 ACAA1P09110 424 aaPredicted RBP16.04■□□□□ 0.16
LIME1-201ENST00000309546 EEF1B2P24534 225 aaKnown RBP16.04■□□□□ 0.16
LIME1-201ENST00000309546 RASSF2P50749 326 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 RELBQ01201 579 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 GUCA2AQ02747 115 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 AADACL4Q5VUY2 407 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 C12orf73Q69YU5 71 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 KDM4DQ6B0I6 523 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 LDLRAD3Q86YD5 345 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 OR5A2Q8NGI9 324 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 C8orf46Q8TAG6 207 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 AQP3Q92482 292 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 TBX5Q99593 518 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 GABARAPL1Q9H0R8 117 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 SLITRK2Q9H156 845 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 MOB1AQ9H8S9 216 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 AP4S1Q9Y587 144 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 MMP24Q9Y5R2 645 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 R4GMQ9 66 aa16.04■□□□□ 0.16
LIME1-201ENST00000309546 IGKV1D-17A0A075B6S4 117 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 A0A1B0GUS0 222 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 RNASEK-C17orf49H0YIS7 233 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 GPR137BO60478 399 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 NRASP01111 189 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 PSG2P11465 335 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 IER3P46695 156 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 CAPZA1P52907 286 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ACTR3P61158 418 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ZNF684Q5T5D7 378 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ZBTB37Q5TC79 503 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 METAP1DQ6UB28 335 aaPredicted RBP16.03■□□□□ 0.16
LIME1-201ENST00000309546 C17orf107Q6ZR85 190 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 KRT74Q7RTS7 529 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 GID4Q8IVV7 300 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 Q8N7P7 452 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ZNRF1Q8ND25 227 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 OR51G2Q8NGK0 314 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 LRTOMTQ8WZ04 291 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 DYRK2Q92630 601 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ITFG2Q969R8 447 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 DMRTB1Q96MA1 342 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ZNF488Q96MN9 340 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 MNTQ99583 582 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 GPR173Q9NS66 373 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 CLN6Q9NWW5 311 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 ENOPH1Q9UHY7 261 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 OR52A1Q9UKL2 312 aa16.03■□□□□ 0.16
LIME1-201ENST00000309546 CAB39Q9Y376 341 aaPredicted RBP16.03■□□□□ 0.16
LIME1-201ENST00000309546 NPFFO15130 113 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 SRSF10O75494 262 aaKnown RBP16.02■□□□□ 0.16
LIME1-201ENST00000309546 NDUFA7O95182 113 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 FBP1P09467 338 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 CAV3P56539 151 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 SRSF4Q08170 494 aaKnown RBP16.02■□□□□ 0.16
LIME1-201ENST00000309546 OLFML2AQ68BL7 652 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 FAM185AQ8N0U4 392 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 BATF2Q8N1L9 274 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 PNKDQ8N490 385 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 WFDC12Q8WWY7 111 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 DUS3LQ96G46 650 aaKnown RBP16.02■□□□□ 0.16
LIME1-201ENST00000309546 CIB1Q99828 191 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 DPAGT1Q9H3H5 408 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 MRM2Q9UI43 246 aaKnown RBP16.02■□□□□ 0.16
LIME1-201ENST00000309546 ZNF222Q9UK12 451 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 MAB21L2Q9Y586 359 aa16.02■□□□□ 0.16
LIME1-201ENST00000309546 BTBD17A6NE02 478 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 A6NIN4 97 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 RPP14O95059 124 aaKnown RBP16.01■□□□□ 0.15
LIME1-201ENST00000309546 APOL3O95236 402 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 FCGR1AP12314 374 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 HAAOP46952 286 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 EFNB1P98172 346 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 EGR3Q06889 387 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 BLMHQ13867 455 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 ODF4Q2M2E3 257 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 SMIM21Q3B7S5 101 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 CLVS2Q5SYC1 327 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 ACP7Q6ZNF0 438 aa16.01■□□□□ 0.15
LIME1-201ENST00000309546 SSX6Q7RTT6 188 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms