RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TRAV36DV7A0A075B6V5 113 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TRAV18A0A075B6X5 111 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 FXYD6-FXYD2A0A087WZ82 144 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 LOC390937A0A1W2PQ73 354 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SLC22A23A1A5C7 686 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF860A6NHJ4 632 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 NPIPB13A6NJU9 1138 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PRR32B1ATL7 298 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 DISC1C4P0D8 188 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 NPIPB4C9JG80 1138 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 E9PLN8 166 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 BLOC1S5-TXNDC5H3BN57 136 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 LDLRAD4O15165 306 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ARPC5O15511 151 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF264O43296 627 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 NDUFA2O43678 99 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RDH16O75452 317 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SCO1O75880 301 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RAB3DO95716 219 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 IGHMP01871 453 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 BGLAPP02818 100 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RLN1P04808 185 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SP1P08047 785 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR4E1P0C645 316 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF35P13682 527 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 GTF2F2P13984 249 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 IGFBP3P17936 291 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RAB3AP20336 220 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PTNP21246 168 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ACHEP22303 614 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RFC3P40938 356 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 AQP2P41181 271 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 KIR3DL2P43630 455 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 POU3F4P49335 361 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 H2BFSP57053 126 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 UBE2MP61081 183 aaKnown RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RPL18Q07020 188 aaKnown RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 FOXF2Q12947 444 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SLC17A1Q14916 467 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TOMM34Q15785 309 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SGCBQ16585 318 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 C2orf76Q3KRA6 126 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 KRTCAP3Q53RY4 240 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SLC18B1Q6NT16 456 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 DEGS2Q6QHC5 323 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 DGAT2L6Q6ZPD8 337 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 MOB3CQ70IA8 216 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM17Q86X19 198 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SERPINA12Q8IW75 414 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 NKAIN3Q8N8D7 197 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ZDHHC22Q8N966 263 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PXT1Q8NFP0 134 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR10H5Q8NGA6 315 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR5T3Q8NGG3 340 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR51L1Q8NGJ5 315 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR51S1Q8NGJ8 323 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR5M8Q8NGP6 311 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR5M1Q8NGP8 315 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR4C3Q8NH37 302 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR1S1Q8NH92 325 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ZPLD1Q8TCW7 415 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TNFAIP8L1Q8WVP5 186 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 TSLPQ969D9 159 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SLC25A28Q96A46 364 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 SEH1LQ96EE3 360 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 MVB12AQ96EY5 273 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 LINC00052Q96N35 136 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR1F2PQ96R84 312 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 LPAR4Q99677 370 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PRRT1Q99946 306 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 VKORC1Q9BQB6 163 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 FXYD6Q9H0Q3 95 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PIGMQ9H3S5 423 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 PRTFDC1Q9NRG1 225 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 VSX1Q9NZR4 365 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 CKLFQ9UBR5 152 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 IKZF2Q9UKS7 526 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 RPH3AQ9Y2J0 694 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-201ENST00000308987 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 MMACHCQ9Y4U1 282 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 CLDN16Q9Y5I7 305 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 HIVEP2P31629 2446 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 YLPM1P49750 1951 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 IGLV1-36A0A0B4J1U3 117 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A0A0B4J2A0 478 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A0A0G2JMM0 328 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A0A1B0GTH9 108 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A0A1W2PPB8 328 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A0A1W2PRS3 328 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 GAGE12BA1L429 117 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PRSS37A4D1T9 235 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 GAGE12HA6NDE8 117 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 METTL21EPA6NDL7 271 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms