RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ICAM2P13598 275 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 GCH1P30793 250 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 THBS3P49746 956 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 C9orf152Q5JTZ5 239 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 ADAD2Q8NCV1 583 aaKnown RBP17.2■□□□□ 0.34
USP48-201ENST00000308271 ZPLD1Q8TCW7 415 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 INTS12Q96CB8 462 aaKnown RBP17.2■□□□□ 0.34
USP48-201ENST00000308271 COX5AP20674 150 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 FUT3P21217 361 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 FUT7Q11130 342 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 DBX2Q6ZNG2 339 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 HEYLQ9NQ87 328 aaPredicted RBP17.2■□□□□ 0.34
USP48-201ENST00000308271 MZT1Q08AG7 82 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 MICBQ29980 383 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 ZNF66Q6ZN08 573 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 BATF2Q8N1L9 274 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 OR5C1Q8NGR4 320 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 OR4A16Q8NH70 328 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 OBP2BQ9NPH6 170 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 MMP17Q9ULZ9 603 aa17.2■□□□□ 0.34
USP48-201ENST00000308271 C20orf202A1L168 122 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 OR2M5A3KFT3 312 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 NXPH2O95156 264 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 IQCJQ1A5X6 159 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 ZNF574Q6ZN55 896 aaPredicted RBP17.19■□□□□ 0.34
USP48-201ENST00000308271 SLC25A26Q70HW3 274 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 LDLRAD3Q86YD5 345 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 GCNT2Q8N0V5 402 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 FBXL14Q8N1E6 418 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 OR10P1Q8NGE3 313 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 DHRS3O75911 302 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 SEC11BP0C7V7 166 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 MUC1P15941 1255 aaPredicted RBP17.19■□□□□ 0.34
USP48-201ENST00000308271 HLA-DRB3P79483 266 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 TNFSF14O43557 240 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 GREM1O60565 184 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 ACTL6BO94805 426 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 OR5AC1P0C628 307 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 PTGER4P35408 488 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 PNRC1Q12796 327 aaPredicted RBP17.19■□□□□ 0.34
USP48-201ENST00000308271 C6orf201Q7Z4U5 140 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 APOBEC4Q8WW27 367 aaKnown RBP17.19■□□□□ 0.34
USP48-201ENST00000308271 LIN7CQ9NUP9 197 aaKnown RBP17.19■□□□□ 0.34
USP48-201ENST00000308271 KLHDC2Q9Y2U9 406 aa17.19■□□□□ 0.34
USP48-201ENST00000308271 LILRA5A6NI73 299 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 VSIG8P0DPA2 414 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 CD200P41217 278 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 P2RY1P47900 373 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 ASCL1P50553 236 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 FUT6P51993 359 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 ACOT6Q3I5F7 207 aaPredicted RBP17.18■□□□□ 0.34
USP48-201ENST00000308271 KLK13Q9UKR3 277 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
USP48-201ENST00000308271 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 H3BP45 60 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 RER1O15258 196 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 SOCS1O15524 211 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 WDR1O75083 606 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 IAPPP10997 89 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 KIR3DL2P43630 455 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 NPBWR1P48145 328 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 PRR13Q9NZ81 148 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 GNG12Q9UBI6 72 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 NPTNQ9Y639 398 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 MYO16Q9Y6X6 1858 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 FAM24AA6NFZ4 105 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
USP48-201ENST00000308271 SPRY1O43609 319 aaPredicted RBP17.18■□□□□ 0.34
USP48-201ENST00000308271 DRAM2Q6UX65 266 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 PRO1933Q9H354 126 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 IGKV1-8A0A0C4DH67 115 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 A0A1W2PPC1 479 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 HS3ST1O14792 307 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 MYBPHQ13203 477 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 BTNL8Q6UX41 500 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 ZNF439Q8NDP4 499 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 TMEM104Q8NE00 496 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 TLNRD1Q9H1K6 362 aa17.18■□□□□ 0.34
USP48-201ENST00000308271 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 A0A0G2JK05 382 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 SPTY2D1-AS1A0A0U1RR47 76 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 ONECUT2O95948 504 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 ZBTB25P24278 435 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 ZNF90Q03938 601 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 CLEC12BQ2HXU8 276 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 C1QL3Q5VWW1 255 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 H2BFWTQ7Z2G1 175 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 V9GYS6 101 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 SEC16AO15027 2179 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 MMP16P51512 607 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
USP48-201ENST00000308271 G3V3Q6 166 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 SULT1A2P50226 295 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 GPX7Q96SL4 187 aaPredicted RBP17.17■□□□□ 0.34
USP48-201ENST00000308271 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
USP48-201ENST00000308271 PARP14Q460N5 1801 aa17.16■□□□□ 0.34
USP48-201ENST00000308271 FSTP19883 344 aa17.16■□□□□ 0.34
USP48-201ENST00000308271 EXT1Q16394 746 aa17.16■□□□□ 0.34
USP48-201ENST00000308271 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms