RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OR5V1Q9UGF6 321 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 H7BYZ3 331 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 MOB1BQ7L9L4 216 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 PRSS42Q7Z5A4 293 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 OR2Y1Q8NGV0 311 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 HGDQ93099 445 aa14.21□□□□□ -0.13
USP42-201ENST00000306177 RCL1Q9Y2P8 373 aaKnown RBP14.21□□□□□ -0.13
USP42-201ENST00000306177 TUBAL3A6NHL2 446 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 AQP7P3A6NL99 342 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 YIF1AO95070 293 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 PDZK1IP1Q13113 114 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 OR2T2Q6IF00 324 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 OR4F5Q8NH21 305 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 MITD1Q8WV92 249 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 ST8SIA2Q92186 375 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 ERGIC1Q969X5 290 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 CLDN23Q96B33 292 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 OR4F4Q96R69 305 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 UCK1Q9HA47 277 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 CABIN1Q9Y6J0 2220 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 SBF2Q86WG5 1849 aa14.21□□□□□ -0.14
USP42-201ENST00000306177 CTAG2O75638 210 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 GP1BAP07359 652 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 CYC1P08574 325 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 C17orf107Q6ZR85 190 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 OR6X1Q8NH79 312 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 AQP8O94778 261 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 CD37P11049 281 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 TRIP6Q15654 476 aaKnown RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 CD226Q15762 336 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 PLA1AQ53H76 456 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 ZNF787Q6DD87 383 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 LSMEM1Q8N8F7 131 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 OR2Z1Q8NG97 314 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 SLC39A7Q92504 469 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 A0A1B0GTH9 108 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 CYR61O00622 381 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 WNT1P04628 370 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 SCN4AP35499 1836 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 UBE2IP63279 158 aaKnown RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 ZNF239Q16600 458 aaKnown RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 ATG4DQ86TL0 474 aaPredicted RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 OR5AP2Q8NGF4 316 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 GINS3Q9BRX5 216 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 ZNF331Q9NQX6 463 aaPredicted RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 FLRT3Q9NZU0 649 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 RFPL4AA6NLU0 287 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 PPP5D1E7EU14 171 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 RFPL4AL1F8VTS6 287 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 HPP00738 406 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 OR5G3P0C626 314 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 PTHLHP12272 177 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 BPIFB3P59826 476 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 ZNF816Q0VGE8 651 aaPredicted RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 ADAM5Q6NVV9 412 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 BTLAQ7Z6A9 289 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 ASB10Q8WXI3 467 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 PINX1Q96BK5 328 aaKnown RBP14.2□□□□□ -0.14
USP42-201ENST00000306177 RASL10BQ96S79 203 aa14.2□□□□□ -0.14
USP42-201ENST00000306177 CLEC18AA5D8T8 446 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 DCTN6O00399 190 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 OR2C1O95371 312 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 AVPR2P30518 371 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 PRDX4Q13162 271 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 HES3Q5TGS1 186 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 CLEC18CQ8NCF0 446 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 OCIAD1Q9NX40 245 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 SEC16AO15027 2179 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 ZNF727A8MUV8 499 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 FFAR1O14842 300 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 WISP3O95389 354 aaPredicted RBP14.19□□□□□ -0.14
USP42-201ENST00000306177 C11orf87Q6NUJ2 197 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 DBX2Q6ZNG2 339 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 FAM58AQ8N1B3 248 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 CT55Q8WUE5 264 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 FBXO17Q96EF6 278 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 ZNF768Q9H5H4 540 aaKnown RBP14.19□□□□□ -0.14
USP42-201ENST00000306177 DVL1O14640 695 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 DVL1P1P54792 670 aaPredicted RBP14.19□□□□□ -0.14
USP42-201ENST00000306177 CLPPQ16740 277 aaPredicted RBP14.19□□□□□ -0.14
USP42-201ENST00000306177 OR4D11Q8NGI4 311 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 CT45A10P0DMU9 189 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 RAC3P60763 192 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 GNB2P62879 340 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 LRRC10Q5BKY1 277 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 CXorf67Q86X51 503 aaPredicted RBP14.19□□□□□ -0.14
USP42-201ENST00000306177 TMEM231Q9H6L2 316 aa14.19□□□□□ -0.14
USP42-201ENST00000306177 A0A1B0GTQ1 180 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 CRYM-AS1A6NIL9 109 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 H3BMH7 237 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 NDUFB3O43676 98 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 SULT1A3P0DMM9 295 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 SULT1A4P0DMN0 295 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 CA6P23280 308 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 ZBTB25P24278 435 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 KIAA0141Q14154 515 aaPredicted RBP14.18□□□□□ -0.14
USP42-201ENST00000306177 ST8SIA5O15466 376 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 RAG2P55895 527 aa14.18□□□□□ -0.14
USP42-201ENST00000306177 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
USP42-201ENST00000306177 OR5H15A6NDH6 313 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms