RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF683Q8IZ20 524 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF764Q96H86 408 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 GMLQ99445 158 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 MAP1LC3BQ9GZQ8 125 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CCL26Q9Y258 94 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 FAM157AC9JC47 383 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 LY86O95711 162 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 NGFP01138 241 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 RNASE1P07998 156 aaKnown RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CD82P27701 267 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 GCAP28676 217 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CEACAM3P40198 252 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 LGALS7P47929 136 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CLDN10P78369 228 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PTRH1Q86Y79 214 aaKnown RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 LILRA3Q8N6C8 439 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF680Q8NEM1 530 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR2V1Q8NHB1 315 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ABHD14AQ9BUJ0 271 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TUBAL3A6NHL2 446 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TNFRSF10CO14798 259 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CDC14BO60729 498 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 FUT3P21217 361 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR5M9Q8NGP3 310 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR1B1Q8NGR6 318 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ISL2Q96A47 359 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 MOGAT1Q96PD6 335 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF576Q9H609 170 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 A4GNTQ9UNA3 340 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PSG11Q9UQ72 335 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 IGKV6D-21A0A0A0MT36 114 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 K7ESF4 209 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 RGS13O14921 159 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TAPBPO15533 448 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF737O75373 536 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 GPX5O75715 221 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 THBS4P35443 961 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 LPAR6P43657 344 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 SSX1Q16384 188 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PRSS36Q5K4E3 855 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ACSM5Q6NUN0 579 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PAQR6Q6TCH4 344 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM207Q6UWW9 146 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR1N2Q8NGR9 330 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PRRX2Q99811 253 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 HMGN4O00479 90 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 FGF17O60258 216 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 LIMK1P53667 647 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 CLDN20P56880 219 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 CDK5R1Q15078 307 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 CEACAM16Q2WEN9 425 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 SLC25A30Q5SVS4 291 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 OTPQ5XKR4 325 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 RAB37Q96AX2 223 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 PLEKHB1Q9UF11 243 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-201ENST00000302528 USP3Q9Y6I4 520 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 SLC37A1P57057 533 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 DUSP8Q13202 625 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 GSG1Q2KHT4 349 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-201ENST00000302528 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ACER3Q9NUN7 267 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 TAAR3PQ9P1P4 343 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 DOT1LQ8TEK3 1739 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 MFNGO00587 321 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 TBX19O60806 448 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ACTL6AO96019 429 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 CD96P40200 585 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
CLIP1-201ENST00000302528 FOXC1Q12948 553 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ANKRD55Q3KP44 614 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 SP6Q3SY56 376 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ALKBH3Q96Q83 286 aaPredicted RBP9.33□□□□□ -0.92
CLIP1-201ENST00000302528 C20orf141Q9NUB4 165 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 SLCO1C1Q9NYB5 712 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 IL17BQ9UHF5 180 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 AMDHD2Q9Y303 409 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 ADAM20O43506 726 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 LANCL1O43813 399 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 KIR2DS2P43631 304 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 GP2P55259 537 aaKnown RBP9.33□□□□□ -0.92
CLIP1-201ENST00000302528 C11orf87Q6NUJ2 197 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM229BQ8NBD8 167 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 NTNG2Q96CW9 530 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 PPIL1Q9Y3C6 166 aa9.33□□□□□ -0.92
CLIP1-201ENST00000302528 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms