RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PPM1FP49593 454 aaPredicted RBP12.75□□□□□ -0.37
CDT1-201ENST00000301019 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 C1orf87Q8N0U7 546 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 RAB24Q969Q5 203 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 NMNAT2Q9BZQ4 307 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 RAB18Q9NP72 206 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 PPP1R14DQ9NXH3 145 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 IGLON5A6NGN9 336 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 GNB2P62879 340 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 H3F3AP84243 136 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 FMODQ06828 376 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 PLAC9Q5JTB6 97 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 AQP3Q92482 292 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 ZNF2Q9BSG1 426 aaPredicted RBP12.75□□□□□ -0.37
CDT1-201ENST00000301019 WNT5BQ9H1J7 359 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 FOXJ2Q9P0K8 574 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 ADAM29Q9UKF5 820 aa12.75□□□□□ -0.37
CDT1-201ENST00000301019 CCDC187A0A096LP49 1063 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 BORCS7-ASMTA0A0B4J1R7 106 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
CDT1-201ENST00000301019 ZNF217O75362 1048 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 DFFBO76075 338 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 MELTFP08582 738 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 HOXA6P31267 233 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
CDT1-201ENST00000301019 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 SGPP2Q8IWX5 399 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 OR52M1Q8NGK5 317 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 NEK7Q8TDX7 302 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 LCN9Q8WX39 176 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 H3BP45 60 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 RPLP1P05386 114 aaKnown RBP12.74□□□□□ -0.37
CDT1-201ENST00000301019 CST2P09228 141 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 FCARP24071 287 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 TNFSF10P50591 281 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 ADIRFQ15847 76 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 ZNF658BQ4V348 819 aaPredicted RBP12.74□□□□□ -0.37
CDT1-201ENST00000301019 TMEM35AQ53FP2 167 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 ZNF774Q6NX45 483 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 SYT13Q7L8C5 426 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 OR5L1Q8NGL2 311 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 ARRDC3Q96B67 414 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 C5orf34Q96MH7 638 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 MEMO1Q9Y316 297 aa12.74□□□□□ -0.37
CDT1-201ENST00000301019 CDC14CA4D256 554 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 RENP00797 406 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 HLA-HP01893 362 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 RAB28P51157 221 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 GLIPR1L1Q6UWM5 242 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 C11orf42Q8N5U0 333 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 TVP23CQ96ET8 276 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 ABHD6Q9BV23 337 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 LRFN1Q9P244 771 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 SRPK3Q9UPE1 567 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 FTCDNL1E5RQL4 147 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 BMP5P22003 454 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 CEACAM8P31997 349 aaPredicted RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 OPRM1P35372 400 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 OR3A4PP47883 348 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 MRPS11P82912 194 aaKnown RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 MGAT2Q10469 447 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 OTOSQ8NHW6 89 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 GPR119Q8TDV5 335 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 SLCO5A1Q9H2Y9 848 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 NBEAQ8NFP9 2946 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 IGKV1D-8A0A087WSZ0 117 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 H0YIG0 161 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 GPR137BO60478 399 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 CTLA4P16410 223 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 LMO1P25800 156 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 RRADP55042 308 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 CLN3Q13286 438 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 OPN5Q6U736 354 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 VN1R4Q7Z5H5 301 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 SLC26A10Q8NG04 563 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 METTL21AQ8WXB1 218 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 TSLPQ969D9 159 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 ASCL3Q9NQ33 180 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 NXT1Q9UKK6 140 aaKnown RBP12.73□□□□□ -0.37
CDT1-201ENST00000301019 INSL6Q9Y581 213 aa12.73□□□□□ -0.37
CDT1-201ENST00000301019 A0A0A6YYD4 124 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 SPINT1O43278 529 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 HSD11B2P80365 405 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 FAM166AQ6J272 317 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 RSC1A1Q92681 617 aa12.72□□□□□ -0.37
CDT1-201ENST00000301019 FAM71F1Q96KD3 344 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms