RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 RAD51DO75771 328 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 KCNJ3P48549 501 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 D2HGDHQ8N465 521 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 HDHD3Q9BSH5 251 aaPredicted RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 SLC25A32Q9H2D1 315 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 NIT2Q9NQR4 276 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 KCNMB2Q9Y691 235 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 TNRC6BQ9UPQ9 1833 aaKnown RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 A0A1W2PQM1 296 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 DXOO77932 396 aaKnown RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 C3AR1Q16581 482 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 OR5AS1Q8N127 324 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 OR8B12Q8NGG6 310 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 OR5M8Q8NGP6 311 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 ST8SIA1Q92185 356 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 KCNJ16Q9NPI9 418 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 SLC17A5Q9NRA2 495 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 ANKUB1A6NFN9 424 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 SLC35A1P78382 337 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 SRSF4Q08170 494 aaKnown RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 RHBDD2Q6NTF9 364 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 RAB11FIP2Q7L804 512 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 MAGT1Q9H0U3 335 aa12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
LPCAT1-201ENST00000283415 BORCS7-ASMTA0A0B4J1R7 106 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 LOC390937A0A1W2PQ73 354 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 A6NLC8 198 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 ETV2O00321 342 aaPredicted RBP12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 RCC1P18754 421 aaPredicted RBP12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 FANCFQ9NPI8 374 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 KCNS2Q9ULS6 477 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 MFSD2BA6NFX1 497 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 GNMTQ14749 295 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 ZNF774Q6NX45 483 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 TMEM229BQ8NBD8 167 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 MS4A18H0YCH9 400 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 MRPL33O75394 65 aaKnown RBP12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 ICAM2P13598 275 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 FSTP19883 344 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 LTC4SQ16873 150 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 MS4A18Q3C1V0 323 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 RNF144BQ7Z419 303 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 S100PBPQ96BU1 408 aa12.14□□□□□ -0.47
LPCAT1-201ENST00000283415 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 TAS2R31P59538 309 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 THEM4Q5T1C6 240 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 AVPI1Q5T686 147 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 GPR157Q5UAW9 335 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 MISPQ8IVT2 679 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 GPX8Q8TED1 209 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SPACA1Q9HBV2 294 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 FTCDNL1E5RQL4 147 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 MSR1P21757 451 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 FCGR2CP31995 323 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 BEND4Q6ZU67 534 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 ASB10Q8WXI3 467 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 FAAP24Q9BTP7 215 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 KCNK7Q9Y2U2 307 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 B3GALNT1O75752 331 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 TTRP02766 147 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SSBP1Q04837 148 aaKnown RBP12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 TGIF1Q15583 401 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 CEACAM16Q2WEN9 425 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 PUSL1Q8N0Z8 303 aaKnown RBP12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 CUL9Q8IWT3 2517 aa12.13□□□□□ -0.47
LPCAT1-201ENST00000283415 SULT1C2O00338 296 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 PHF1O43189 567 aaPredicted RBP12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 DHHO43323 396 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 ZNF44P15621 663 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 PPIAP62937 165 aaKnown RBP12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 CARFQ8N187 725 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 OR6K3Q8NGY3 331 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 OR6S1Q8NH40 331 aa12.12□□□□□ -0.47
LPCAT1-201ENST00000283415 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms