RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 CCL4P13236 92 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 EPHA8P29322 1005 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-201ENST00000275233 FABP9Q0Z7S8 132 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 ASAH1Q13510 395 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 TRA2AQ13595 282 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHPRH-201ENST00000275233 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-201ENST00000275233 NHSQ6T4R5 1651 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 SPINK4O60575 86 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 CYC1P08574 325 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 PTBP1P26599 531 aaKnown RBP eCLIP10.61□□□□□ -0.715e-7■■■■□ 26.3
SHPRH-201ENST00000275233 AVPR2P30518 371 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 TSPAN32Q96QS1 320 aa10.61□□□□□ -0.71
SHPRH-201ENST00000275233 ERRFI1Q9UJM3 462 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-201ENST00000275233 TMEM272A0A1B0GTI8 110 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 SPAARA0A1B0GVQ0 90 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 XKRY2A2RUG3 117 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 TPBGQ13641 420 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 KISS1Q15726 138 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 BAK1Q16611 211 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 RNF151Q2KHN1 245 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 C6orf201Q7Z4U5 140 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 AKR7A2O43488 359 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 FAHD1Q6P587 224 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 M1APQ8TC57 530 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 MRGPRDQ8TDS7 321 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 KPTNQ9Y664 436 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 ATP6V1G2-DDX39BF2Z307 99 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 SPNP16150 400 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 PCBP4P57723 403 aaKnown RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 ERVFC1-1P60608 527 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 LINC00303Q3SY05 128 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 TMEM108Q6UXF1 575 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 ZNF707Q96C28 371 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 WDR89Q96FK6 387 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 PAPPA2Q9BXP8 1791 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 DNAJB12Q9NXW2 375 aaKnown RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 A0A0B4J2E0 115 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 A0A1B0GX12 115 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 ZNF320A2RRD8 509 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 PYCARD-AS1I3L0S3 204 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 CDX4O14627 284 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 PEX11BO96011 259 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 MAGEA5P43359 124 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 KLF3P57682 345 aaPredicted RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 RHOBP62745 196 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 SLC24A4Q8NFF2 622 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 LHX9Q9NQ69 397 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 J3KRW8 73 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 TGIF2LXQ8IUE1 241 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 SIGLECL1Q8N7X8 197 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 RBM14Q96PK6 669 aaKnown RBP10.6□□□□□ -0.71
SHPRH-201ENST00000275233 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 DOCK1Q14185 1865 aa10.6□□□□□ -0.71
SHPRH-201ENST00000275233 IGKV3-7A0A075B6H7 116 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 ADAM20O43506 726 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 DUS4LO95620 317 aaKnown RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 C1QBP02746 253 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 HTN1P15515 57 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 FUT3P21217 361 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 TOMM34Q15785 309 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 ZNF528Q3MIS6 628 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 GPBAR1Q8TDU6 330 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 KCNK15Q9H427 330 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 GLI3P10071 1580 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 RFPL4AA6NLU0 287 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 RFPL4AL1F8VTS6 287 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 EPPINO95925 133 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 APELAP0DMC3 54 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 NXPH1P58417 271 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 DHRS7BQ6IAN0 325 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 KIAA1958Q8N8K9 716 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 YIPF6Q96EC8 236 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 OR2D2Q9H210 308 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 FGF20Q9NP95 211 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 FOXJ3Q9UPW0 622 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 CNTRLQ7Z7A1 2325 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 TMPRSS2O15393 492 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 B3GALNT1O75752 331 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 SULT1A3P0DMM9 295 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 SULT1A4P0DMN0 295 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 FUT7Q11130 342 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 EIF3IQ13347 325 aaKnown RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 ZFP64Q9NPA5 681 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 BHLHA15Q7RTS1 189 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 F5H697 171 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 CYR61O00622 381 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 TNFSF14O43557 240 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 DRD3P35462 400 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 OR1L4Q8NGR5 311 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 C4orf45Q96LM5 186 aa10.59□□□□□ -0.71
SHPRH-201ENST00000275233 ZNF629Q9UEG4 869 aaPredicted RBP10.59□□□□□ -0.71
SHPRH-201ENST00000275233 ASPDHA6ND91 283 aa10.58□□□□□ -0.71
SHPRH-201ENST00000275233 MBP02144 154 aa10.58□□□□□ -0.71
SHPRH-201ENST00000275233 LPAR6P43657 344 aa10.58□□□□□ -0.71
SHPRH-201ENST00000275233 OR13G1Q8NGZ3 307 aa10.58□□□□□ -0.71
SHPRH-201ENST00000275233 DYNC2LI1Q8TCX1 351 aa10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms