RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 OR5P3Q8WZ94 311 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 TMEM59Q9BXS4 323 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 LPAR5Q9H1C0 372 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ESPL1Q14674 2120 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 OR5B21A6NL26 309 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 CRTAPO75718 401 aaPredicted RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 MPIG6BO95866 241 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 CD3GP09693 182 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 PPP3CBP16298 524 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 INPP1P49441 399 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ASCL1P50553 236 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 GPR176Q14439 515 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ZNF718Q3SXZ3 478 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 MBNL2Q5VZF2 373 aaKnown RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 OR52I2Q8NH67 350 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 FCAMRQ8WWV6 532 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 URM1Q9BTM9 101 aaKnown RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 METTL9Q9H1A3 318 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 AUNIPQ9H7T9 357 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 IL36GQ9NZH8 169 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 NOP16Q9Y3C1 178 aaKnown RBP12.09□□□□□ -0.47
SS18-201ENST00000269137 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 KITLGP21583 273 aa12.08□□□□□ -0.48
SS18-201ENST00000269137 RPS27AP62979 156 aaKnown RBP12.08□□□□□ -0.48
SS18-201ENST00000269137 MOGAT2Q3SYC2 334 aa12.08□□□□□ -0.48
SS18-201ENST00000269137 TM2D1Q9BX74 207 aa12.08□□□□□ -0.48
SS18-201ENST00000269137 C11orf54Q9H0W9 315 aaPredicted RBP12.08□□□□□ -0.48
SS18-201ENST00000269137 DIDO1Q9BTC0 2240 aaKnown RBP12.08□□□□□ -0.48
SS18-201ENST00000269137 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.48
SS18-201ENST00000269137 A0A1W2PP11 408 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 SULT1C2O00338 296 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 ORC5O43913 435 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 MGMTP16455 207 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 CA6P23280 308 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 PRSS3P35030 304 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 MPV17P39210 176 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 RFX2P48378 723 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GPM6AP51674 278 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 NKX6-1P78426 367 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 ZNF57Q68EA5 555 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 CCBE1Q6UXH8 406 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 SAXO1Q8IYX7 474 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 ACBD4Q8NC06 268 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 OR56B1Q8NGI3 324 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 AQP3Q92482 292 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 RNF170Q96K19 258 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GAL3ST1Q99999 423 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 BANF2Q9H503 90 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 SCPEP1Q9HB40 452 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 PCDHB16Q9NRJ7 776 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 ZNF732B4DXR9 585 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 SPRY1O43609 319 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 ANGPTL7O43827 346 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 MELTFP08582 738 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 PTHLHP12272 177 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 CD40P25942 277 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GLRXP35754 106 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GDNFP39905 211 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 VEGFCP49767 419 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GNG3P63215 75 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 RSU1Q15404 277 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 MZT2BQ6NZ67 158 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 TMEM200AQ86VY9 491 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 CALHM1Q8IU99 346 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 Q8NFD4 153 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 LILRB4Q8NHJ6 448 aa12.07□□□□□ -0.48
SS18-201ENST00000269137 GCDHQ92947 438 aaPredicted RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
SS18-201ENST00000269137 HIVEP3Q5T1R4 2406 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 IGKV1-12A0A0C4DH73 117 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 MEIOCA2RUB1 952 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 WIPF3A6NGB9 483 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 H7C417 338 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 LYRM1O43325 122 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 IGKV1D-12P01611 117 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 THBDP07204 575 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 GTF2F2P13984 249 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 SERPINA2P20848 420 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 PTAFRP25105 342 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 GCH1P30793 250 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 ADORA2A-AS1P86434 159 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 SSBP1Q04837 148 aaKnown RBP12.06□□□□□ -0.48
SS18-201ENST00000269137 DYRK1AQ13627 763 aa12.06□□□□□ -0.48
SS18-201ENST00000269137 KLF9Q13886 244 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms