RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 NAA11Q9BSU3 229 aaPredicted RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 TM2D1Q9BX74 207 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 PLEKHJ1Q9NW61 149 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 C14orf166Q9Y224 244 aaKnown RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 LOC102723996A0A087X1L8 192 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF98A6NK75 572 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 EIF1BO60739 113 aaKnown RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 SERPINA5P05154 406 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 TMEM225BP0DP42 221 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 CD79AP11912 226 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 COX6A1P12074 109 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 DSCR4P56555 118 aaPredicted RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 GUCA2BQ16661 112 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 OR5T2Q8NGG2 359 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 ARL11Q969Q4 196 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF2Q9BSG1 426 aaPredicted RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 ADAT1Q9BUB4 502 aaKnown RBP17.26■□□□□ 0.35
NEIL3-201ENST00000264596 ANGPTL4Q9BY76 406 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 TMEM231Q9H6L2 316 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 WDR54Q9H977 334 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 TMEM100Q9NV29 134 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 HPF1Q9NWY4 346 aa17.26■□□□□ 0.35
NEIL3-201ENST00000264596 CNTRLQ7Z7A1 2325 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 DHRS7CA6NNS2 312 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 ANGPTL7O43827 346 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 FGF5P12034 268 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 FOXL2NBQ6ZUU3 175 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SLC16A14Q7RTX9 510 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 MAML2Q8IZL2 1156 aaPredicted RBP17.25■□□□□ 0.35
NEIL3-201ENST00000264596 TMEM156Q8N614 296 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SPTSSAQ969W0 71 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SGK3Q96BR1 496 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 IMMP1LQ96LU5 166 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SDK2Q58EX2 2172 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 A0A0J9YW62 118 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF705EA8MWA4 302 aaPredicted RBP17.25■□□□□ 0.35
NEIL3-201ENST00000264596 LYL1P12980 280 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF84P51523 738 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SSR4P51571 173 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 MTCP1P56278 107 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 HIST1H3AP68431 136 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 EIF3IQ13347 325 aaKnown RBP17.25■□□□□ 0.35
NEIL3-201ENST00000264596 CCDC157Q569K6 752 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 PABPC1L2AQ5JQF8 200 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 HIST2H3PS2Q5TEC6 136 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 HIST2H3AQ71DI3 136 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 PUSL1Q8N0Z8 303 aaKnown RBP17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SEMA6DQ8NFY4 1073 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 RHBDD1Q8TEB9 315 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 AQP10Q96PS8 301 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 SRXN1Q9BYN0 137 aa17.25■□□□□ 0.35
NEIL3-201ENST00000264596 NXT1Q9UKK6 140 aaKnown RBP17.25■□□□□ 0.35
NEIL3-201ENST00000264596 FAM230AA0A1W2PPH8 454 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 PMS2P1A4D2B8 440 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 VAMP5O95183 116 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 CSTBP04080 98 aaKnown RBP17.24■□□□□ 0.35
NEIL3-201ENST00000264596 KLK3P07288 261 aaPredicted RBP17.24■□□□□ 0.35
NEIL3-201ENST00000264596 OTX1P32242 354 aaPredicted RBP17.24■□□□□ 0.35
NEIL3-201ENST00000264596 ZIC4Q8N9L1 334 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 NAXEQ8NCW5 288 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 PCDHGA1Q9Y5H4 931 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 HS3ST3B1Q9Y662 390 aa17.24■□□□□ 0.35
NEIL3-201ENST00000264596 SPRY1O43609 319 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 IFNA2P01563 188 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 FAM157CP0CG43 387 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 ACKR3P25106 362 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 RBMXP38159 391 aaKnown RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 TMEM88Q6PEY1 159 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 NAT6Q93015 286 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 SLC5A7Q9GZV3 580 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 SAV1Q9H4B6 383 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 IFT22Q9H7X7 185 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF581Q9P0T4 197 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 FOXD3Q9UJU5 478 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 FIGNL2A6NMB9 653 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 F8W036 122 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 CCL4P13236 92 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 HOXB1P14653 301 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF133P52736 654 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 BLOC1S1P78537 153 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF700Q9H0M5 742 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 TREM1Q9NP99 234 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF629Q9UEG4 869 aaPredicted RBP17.23■□□□□ 0.35
NEIL3-201ENST00000264596 SIT1Q9Y3P8 196 aa17.23■□□□□ 0.35
NEIL3-201ENST00000264596 PET100P0DJ07 73 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 EXT1Q16394 746 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 IAH1Q2TAA2 248 aaPredicted RBP17.22■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF468Q5VIY5 522 aaPredicted RBP17.22■□□□□ 0.35
NEIL3-201ENST00000264596 SVBPQ8N300 66 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 OR4A4PQ8NGN8 299 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 FAAP24Q9BTP7 215 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 HRH4Q9H3N8 390 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 MSTNO14793 375 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
NEIL3-201ENST00000264596 ZNF205O95201 554 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 CFIP05156 583 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 H2AFB1P0C5Y9 115 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 RRADP55042 308 aa17.22■□□□□ 0.35
NEIL3-201ENST00000264596 RBM39Q14498 530 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms