RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CRTAPO75718 401 aaPredicted RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 SYNGR4O95473 234 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 SPINK2P20155 84 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 MRPS10P82664 201 aaKnown RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 QRFPP83859 136 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 CDNFQ49AH0 187 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 ZNF529Q6P280 563 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 RBMS3Q6XE24 437 aaKnown RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 TMUB2Q71RG4 321 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 CPT1CQ8TCG5 803 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 SOCS1O15524 211 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 HLA-HP01893 362 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 RD3LP0DJH9 198 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 SPP1P10451 314 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 CD37P11049 281 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 LIPCP11150 499 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 CD46P15529 392 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 HAGHLQ6PII5 290 aaPredicted RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 RHOUQ7L0Q8 258 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 CD163Q86VB7 1156 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 GABRG1Q8N1C3 465 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 FOXRED1Q96CU9 486 aaPredicted RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 DNTTIP1Q9H147 329 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 SLC17A5Q9NRA2 495 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 RAB22AQ9UL26 194 aa11.84□□□□□ -0.51
VMP1-201ENST00000262291 KLF13Q9Y2Y9 288 aaPredicted RBP11.84□□□□□ -0.51
VMP1-201ENST00000262291 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 ACAA1P09110 424 aaPredicted RBP11.83□□□□□ -0.52
VMP1-201ENST00000262291 FCGR2AP12318 317 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 C4BPBP20851 252 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 GK2Q14410 553 aaPredicted RBP11.83□□□□□ -0.52
VMP1-201ENST00000262291 SLC10A1Q14973 349 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 RAB35Q15286 201 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 STEAP1BQ6NZ63 245 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 DNM1P46Q6ZS02 220 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 MEIOBQ8N635 442 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 OR2H1Q9GZK4 316 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 SLCO5A1Q9H2Y9 848 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 SPRR3Q9UBC9 169 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 DHRS3O75911 302 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 TGM6O95932 706 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CST2P09228 141 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 VSIG10L2P0DP72 767 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CCL1P22362 96 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CRYGSP22914 178 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CTSSP25774 331 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 SCGB2B2Q4G0G5 96 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
VMP1-201ENST00000262291 GSG1LQ6UXU4 331 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CDH26Q8IXH8 852 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
VMP1-201ENST00000262291 REEP6Q96HR9 211 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 BIN3Q9NQY0 253 aa11.83□□□□□ -0.52
VMP1-201ENST00000262291 FAM230AA0A1W2PPH8 454 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 METTL21EPA6NDL7 271 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 CSF1P09603 554 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 PVALBP20472 110 aaPredicted RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 SERPINA2P20848 420 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 OTX1P32242 354 aaPredicted RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 KISS1Q15726 138 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 SFT2D1Q8WV19 159 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 C1orf147Q96MC9 270 aaPredicted RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 IP6K3Q96PC2 410 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 OR10A2Q9H208 303 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 NDRG3Q9UGV2 375 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 CACNA1GO43497 2377 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 NAP1L6A6NFF2 107 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 ANGPTL7O43827 346 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 RAB3DO95716 219 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 BPNT1O95861 308 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 AKAIN1P0CW23 69 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 SEC61A1P61619 476 aaKnown RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 ZNF260Q3ZCT1 412 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 ZNF660Q6AZW8 331 aaPredicted RBP11.82□□□□□ -0.52
VMP1-201ENST00000262291 PGAP1Q75T13 922 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 C15orf40Q8WUR7 153 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 NIT2Q9NQR4 276 aa11.82□□□□□ -0.52
VMP1-201ENST00000262291 PRSS50Q9UI38 385 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms