RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MRGPRX1Q96LB2 322 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 FOXB1Q99853 325 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
CUX2-201ENST00000261726 CD40P25942 277 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MIDNQ504T8 468 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 FNDC7Q5VTL7 733 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 A0A1B0GUH1 482 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
CUX2-201ENST00000261726 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 APOBEC3DQ96AK3 386 aaPredicted RBP12.82□□□□□ -0.36
CUX2-201ENST00000261726 PECRQ9BY49 303 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SLC25A37Q9NYZ2 338 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 B9D1Q9UPM9 204 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 PSG11Q9UQ72 335 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 FAM157AC9JC47 383 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 DNPH1O43598 174 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SLC36A1Q7Z2H8 476 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 ADAM20O43506 726 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SMIM18P0DKX4 95 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SFTPA2Q8IWL1 248 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SFTPA1Q8IWL2 248 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 RNF2Q99496 336 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 OR1A1Q9P1Q5 309 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 AVPR2P30518 371 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CCKARP32238 428 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 GNG4P50150 75 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 B3GNT9Q6UX72 402 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CALHM3Q86XJ0 350 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 OR1F12Q8NHA8 337 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 TTRP02766 147 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CTSLP07711 333 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CA6P23280 308 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 EVX1P49640 407 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 LYZP61626 148 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 OR6S1Q8NH40 331 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 CDCA4Q9BXL8 241 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 ASB1Q9Y576 335 aa12.82□□□□□ -0.36
CUX2-201ENST00000261726 THBS4P35443 961 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 NOVA1P51513 510 aaKnown RBP12.81□□□□□ -0.36
CUX2-201ENST00000261726 DGAT2L7PQ6IED9 249 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 KIRREL2Q6UWL6 708 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 AANATQ16613 207 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 LINC00303Q3SY05 128 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 ZNF766Q5HY98 468 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 ABHD14AQ9BUJ0 271 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 RNASEK-C17orf49H0YIS7 233 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 NGFP01138 241 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 ZNF154Q13106 437 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 Q3ZCU0 254 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 BTNL3Q6UXE8 466 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 WASHC3Q9Y3C0 194 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 SNRPGP15A8MWD9 76 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 AREGP15514 252 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 BSGP35613 385 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 SLC37A1P57057 533 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 DPTQ07507 201 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 HFEQ30201 348 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 MRGPREQ86SM8 312 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 SIRT3Q9NTG7 399 aaPredicted RBP12.81□□□□□ -0.36
CUX2-201ENST00000261726 RNF24Q9Y225 148 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 CALCRP30988 508 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 OR4C3Q8NH37 302 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 UQCC1Q9NVA1 299 aa12.81□□□□□ -0.36
CUX2-201ENST00000261726 ORM2P19652 201 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 LSM11P83369 360 aaKnown RBP eCLIP12.8□□□□□ -0.36
CUX2-201ENST00000261726 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 TOLLIPQ9H0E2 274 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
CUX2-201ENST00000261726 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
CUX2-201ENST00000261726 OR1B1Q8NGR6 318 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
CUX2-201ENST00000261726 CRYABP02511 175 aaKnown RBP12.8□□□□□ -0.36
CUX2-201ENST00000261726 LPAR6P43657 344 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 AQP6Q13520 282 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 OCIAD1Q9NX40 245 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 RPEL1Q2QD12 228 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 SLC25A19Q9HC21 320 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 TAAR3PQ9P1P4 343 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 ANKRD34CP0C6C1 535 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 CCR5P51681 352 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
CUX2-201ENST00000261726 PPIL1Q9Y3C6 166 aa12.8□□□□□ -0.36
CUX2-201ENST00000261726 A0A087WUJ7 227 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 CAMPP49913 170 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms