RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LRRC18Q8N456 261 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 TMEM161BQ8NDZ6 487 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 VN1R2Q8NFZ6 395 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 OR52H1Q8NGJ2 320 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 OR5H6Q8NGV6 325 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 BLOC1S5Q8TDH9 187 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 CREB3L1Q96BA8 519 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 CAPZA3Q96KX2 299 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 BIRC8Q96P09 236 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 HBEGFQ99075 208 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 TSNAXQ99598 290 aaKnown RBP3.06□□□□□ -1.92
CCDC54-201ENST00000261058 MED18Q9BUE0 208 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 PDCD10Q9BUL8 212 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 TMBIM4Q9HC24 238 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 HMG20AQ9NP66 347 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 FGFR1OP2Q9NVK5 253 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 MARCH5Q9NX47 278 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 GSKIPQ9P0R6 139 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 GNPTGQ9UJJ9 305 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 RCL1Q9Y2P8 373 aaKnown RBP3.06□□□□□ -1.92
CCDC54-201ENST00000261058 CLIP1P30622 1438 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 WRNQ14191 1432 aaPredicted RBP eCLIP3.06□□□□□ -1.92
CCDC54-201ENST00000261058 IFT140Q96RY7 1462 aa3.06□□□□□ -1.92
CCDC54-201ENST00000261058 CEMIPQ8WUJ3 1361 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 TCRBV9S1A1TA0A576 114 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 IDSB3KWA1 339 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 H3BQF6 201 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 KCNK1O00180 336 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 KLRC4O43908 158 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 POP7O75817 140 aaKnown RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ORM1P02763 201 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 FGF1P05230 155 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 C2P06681 752 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ZNF806P0C7X5 589 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 HLA-GP17693 338 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 IL12AP29459 219 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 GNRHRP30968 328 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 NTSP30990 170 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 SSTR5P35346 364 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 COILP38432 576 aaPredicted RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 PTGDSP41222 190 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 SSR4P51571 173 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 CRISP1P54107 249 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 UBE2MP61081 183 aaKnown RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 RPS14P62263 151 aaKnown RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 GNB2P62879 340 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 SLC35B1P78383 322 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 TPBGQ13641 420 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 MAD2L1BPQ15013 274 aaPredicted RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ATP6AP1Q15904 470 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 MED27Q6P2C8 311 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 DNM1P34Q6PK57 102 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 UNQ9370/PRO34162Q6UXP9 181 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 IL34Q6ZMJ4 242 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ZNF836Q6ZNA1 936 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ZBTB8OSQ8IWT0 167 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 CMTM1Q8IZ96 169 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 STPG2Q8N412 459 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 TMEM251Q8N6I4 163 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 CLDN22Q8N7P3 220 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 OR2M7Q8NG81 312 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 OR5L1Q8NGL2 311 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 C11orf40Q8WZ69 217 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 PTH2Q96A98 100 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 SFRP2Q96HF1 295 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 C14orf144Q96I85 54 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 TMEM56Q96MV1 263 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ZNF75AQ96N20 296 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 GGACTQ9BVM4 153 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 MRPS26Q9BYN8 205 aaKnown RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 REEP4Q9H6H4 257 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 ISG20L2Q9H9L3 353 aaKnown RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 NMNAT1Q9HAN9 279 aaPredicted RBP3.05□□□□□ -1.92
CCDC54-201ENST00000261058 PLEKHA1Q9HB21 404 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 NIT2Q9NQR4 276 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 CLN6Q9NWW5 311 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 HRASLS2Q9NWW9 162 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 DDIT4Q9NX09 232 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 DKKL1Q9UK85 242 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 TMEM56-RWDD3S4R434 201 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 VPS8Q8N3P4 1428 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CCDC54-201ENST00000261058 GLYATL1P3A0A0U1RQE8 302 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 ANKRD20A5PA0PJZ0 165 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 TSPAN11A1L157 253 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 OR5B21A6NL26 309 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 HIDE1A8MVS5 230 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 OR11H12B2RN74 326 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 PPP1R2P9O14990 202 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 MRPS12O15235 138 aaKnown RBP3.04□□□□□ -1.92
CCDC54-201ENST00000261058 MAGEB4O15481 346 aaPredicted RBP3.04□□□□□ -1.92
CCDC54-201ENST00000261058 TGOLN2O43493 480 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 ALOX12BO75342 701 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 SUPT7LO94864 414 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 RCBTB2O95199 551 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 TNFAIP8O95379 198 aa3.04□□□□□ -1.92
CCDC54-201ENST00000261058 LGALS2P05162 132 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms