RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CYC1P08574 325 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 PTGER4P35408 488 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 BLOC1S1P78537 153 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 OR9K2Q8NGE7 335 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 ADAMTS17Q8TE56 1095 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 ACKR4Q9NPB9 350 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 LPAR3Q9UBY5 353 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 DHRS7CA6NNS2 312 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 IFNA2P01563 188 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 SFTPBP07988 381 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 CCL3P10147 92 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 ZNF84P51523 738 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 S100A10P60903 97 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 OPN5Q6U736 354 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 GALNTL5Q7Z4T8 443 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 SAP25Q8TEE9 199 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 NAA11Q9BSU3 229 aaPredicted RBP13.33□□□□□ -0.28
DDX56-201ENST00000258772 ANGPTL4Q9BY76 406 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 WDR54Q9H977 334 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 PLEK2Q9NYT0 353 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 CARHSP1Q9Y2V2 147 aaKnown RBP13.33□□□□□ -0.28
DDX56-201ENST00000258772 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 APOC1P02654 83 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 SERPINA5P05154 406 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 LIFP15018 202 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 GABRR1P24046 479 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 RBMXP38159 391 aaKnown RBP13.32□□□□□ -0.28
DDX56-201ENST00000258772 RBM39Q14498 530 aaKnown RBP13.32□□□□□ -0.28
DDX56-201ENST00000258772 RAET1LQ5VY80 246 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 TMEM88Q6PEY1 159 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 IL34Q6ZMJ4 242 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 SGK3Q96BR1 496 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 FBXO17Q96EF6 278 aa13.32□□□□□ -0.28
DDX56-201ENST00000258772 ZNF2Q9BSG1 426 aaPredicted RBP13.32□□□□□ -0.28
DDX56-201ENST00000258772 ADAT1Q9BUB4 502 aaKnown RBP13.32□□□□□ -0.28
DDX56-201ENST00000258772 FOXD3Q9UJU5 478 aaPredicted RBP13.32□□□□□ -0.28
DDX56-201ENST00000258772 IGHV1-45A0A0A0MS14 117 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 TAAR5O14804 337 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 RRP8O43159 456 aaKnown RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 ECI1P42126 302 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 DSCR4P56555 118 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 SNAI3Q3KNW1 292 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 ESX1Q8N693 406 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 SPTSSAQ969W0 71 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 CLDN23Q96B33 292 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 ZNF775Q96BV0 537 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 ZNF837Q96EG3 531 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 SAT2Q96F10 170 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 IMMP1LQ96LU5 166 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 Q96M66 194 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 CNTNAP3Q9BZ76 1288 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 TMEM231Q9H6L2 316 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 TREM1Q9NP99 234 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 UQCC1Q9NVA1 299 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 NDUFA2O43678 99 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 HKR1P10072 659 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 FGF5P12034 268 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 ZNF708P17019 499 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 FLI1Q01543 452 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 IAH1Q2TAA2 248 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 RPL7L1Q6DKI1 246 aaKnown RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 H3F3CQ6NXT2 135 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 RPUSD3Q6P087 351 aaKnown RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 FOXRED2Q8IWF2 684 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 SULF2Q8IWU5 870 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 HDHD3Q9BSH5 251 aaPredicted RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 ULBP2Q9BZM5 246 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 FSCN3Q9NQT6 498 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 GPR173Q9NS66 373 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 HPF1Q9NWY4 346 aa13.31□□□□□ -0.28
DDX56-201ENST00000258772 NXT1Q9UKK6 140 aaKnown RBP13.31□□□□□ -0.28
DDX56-201ENST00000258772 G3V3Y1 287 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 TMEM225BP0DP42 221 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 SUCLG1P53597 346 aaKnown RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 MTCP1P56278 107 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 EIF5AP63241 154 aaKnown RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 SPEM2Q0P670 501 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 FAM27BQ5VT28 67 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 HAGHLQ6PII5 290 aaPredicted RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 MAML2Q8IZL2 1156 aaPredicted RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 INTS12Q96CB8 462 aaKnown RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 JSRP1Q96MG2 331 aaPredicted RBP13.3□□□□□ -0.28
DDX56-201ENST00000258772 SEC11CQ9BY50 192 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 TAF9BQ9HBM6 251 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 DECR2Q9NUI1 292 aa13.3□□□□□ -0.28
DDX56-201ENST00000258772 NDRG3Q9UGV2 375 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms