RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FOSL2P15408 326 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 S100PP25815 95 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 PLEKHA2Q9HB19 425 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 VSTM2BA6NLU5 285 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 SERPINE3A8MV23 424 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 SEC11BP0C7V7 166 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 PRF1P14222 555 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 SERPINA2P20848 420 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 RNF4P78317 190 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 C1orf189Q5VU69 101 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 NOXO1Q8NFA2 376 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 OR1L3Q8NH93 324 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 LMX1AQ8TE12 382 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 LIN37Q96GY3 246 aaPredicted RBP13.62□□□□□ -0.23
DDX55-201ENST00000238146 WFDC1Q9HC57 220 aa13.62□□□□□ -0.23
DDX55-201ENST00000238146 MCTS1Q9ULC4 181 aaKnown RBP13.62□□□□□ -0.23
DDX55-201ENST00000238146 CRYM-AS1A6NIL9 109 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 STMND1H3BQB6 276 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 IGHV2-70P01814 119 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 CTSDP07339 412 aaPredicted RBP13.61□□□□□ -0.23
DDX55-201ENST00000238146 ALDH3B1P43353 468 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 SULT1A1P50225 295 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 OR2B8PP59922 312 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 CARD17Q5XLA6 110 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 SHISA6Q6ZSJ9 500 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 ZNF283Q8N7M2 679 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 THAP3Q8WTV1 239 aaPredicted RBP13.61□□□□□ -0.23
DDX55-201ENST00000238146 UMAD1C9J7I0 102 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 C1QL1O75973 258 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 IGHG1P01857 330 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 MBPP02686 304 aaPredicted RBP13.61□□□□□ -0.23
DDX55-201ENST00000238146 OPN1LWP04000 364 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 MYBPHQ13203 477 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 UEVLDQ8IX04 471 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 SLC25A43Q8WUT9 341 aaPredicted RBP13.61□□□□□ -0.23
DDX55-201ENST00000238146 MALSU1Q96EH3 234 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 GNRHR2Q96P88 292 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 CDCA3Q99618 268 aaPredicted RBP13.61□□□□□ -0.23
DDX55-201ENST00000238146 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 LUZP4Q9P127 313 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 MMP17Q9ULZ9 603 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 RTTNQ86VV8 2226 aa13.61□□□□□ -0.23
DDX55-201ENST00000238146 A0A1W2PPC4 97 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 A0A1W2PPE2 198 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 AP4M1O00189 453 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 EIF2S3P41091 472 aaKnown RBP13.6□□□□□ -0.23
DDX55-201ENST00000238146 CAMLGP49069 296 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 STARD6P59095 220 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 ZNF239Q16600 458 aaKnown RBP13.6□□□□□ -0.23
DDX55-201ENST00000238146 ACER2Q5QJU3 275 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 SLC25A47Q6Q0C1 308 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 C6orf201Q7Z4U5 140 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 TMEM156Q8N614 296 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 OR1J1Q8NGS3 322 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 TCTEX1D2Q8WW35 142 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 HDHD3Q9BSH5 251 aaPredicted RBP13.6□□□□□ -0.23
DDX55-201ENST00000238146 MYO15AQ9UKN7 3530 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 E5RGE8 158 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 ECI1P42126 302 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 RPUSD3Q6P087 351 aaKnown RBP13.6□□□□□ -0.23
DDX55-201ENST00000238146 LYZL4Q96KX0 146 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 MESP1Q9BRJ9 268 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 GINS3Q9BRX5 216 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 TM2D1Q9BX74 207 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 MTIF3Q9H2K0 278 aaKnown RBP13.6□□□□□ -0.23
DDX55-201ENST00000238146 C19orf12Q9NSK7 152 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 DECR2Q9NUI1 292 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 NSG2Q9Y328 171 aa13.6□□□□□ -0.23
DDX55-201ENST00000238146 RHPN2P1A8MT19 583 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
DDX55-201ENST00000238146 TRAF3IP2O43734 574 aaPredicted RBP13.59□□□□□ -0.23
DDX55-201ENST00000238146 LMO1P25800 156 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 SUMO3P55854 103 aaPredicted RBP13.59□□□□□ -0.23
DDX55-201ENST00000238146 BCL2L14Q9BZR8 327 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 LIME1Q9H400 295 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 PADI1Q9ULC6 663 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 TRBV23-1A0A0A0MS06 115 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
DDX55-201ENST00000238146 P2RY1P47900 373 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 RHEBQ15382 184 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 UBE2V2Q15819 145 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 SP6Q3SY56 376 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 DTX1Q86Y01 620 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 MRPL38Q96DV4 380 aaKnown RBP13.59□□□□□ -0.23
DDX55-201ENST00000238146 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 FBXO7Q9Y3I1 522 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 ADAMTS9Q9P2N4 1935 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 MYO7BQ6PIF6 2116 aa13.59□□□□□ -0.23
DDX55-201ENST00000238146 BORCS7-ASMTA0A0B4J1R7 106 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 EPOPA6NHQ4 379 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 ZNF814B7Z6K7 855 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 MSTNO14793 375 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 CA11O75493 328 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 SUCLG1P53597 346 aaKnown RBP13.58□□□□□ -0.23
DDX55-201ENST00000238146 SLC35A1P78382 337 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 HYAL1Q12794 435 aa13.58□□□□□ -0.23
DDX55-201ENST00000238146 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms