RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZNF638Q14966 1978 aaKnown RBP16.4■□□□□ 0.22
CLIP2-201ENST00000223398 MRM1Q6IN84 353 aaKnown RBP16.4■□□□□ 0.22
CLIP2-201ENST00000223398 FAAP24Q9BTP7 215 aa16.4■□□□□ 0.22
CLIP2-201ENST00000223398 TMPRSS13Q9BYE2 586 aa16.4■□□□□ 0.22
CLIP2-201ENST00000223398 SMCO4Q9NRQ5 59 aa16.4■□□□□ 0.22
CLIP2-201ENST00000223398 MED9Q9NWA0 146 aa16.4■□□□□ 0.22
CLIP2-201ENST00000223398 AQP7P3A6NL99 342 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 FCARP24071 287 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 VMA21Q3ZAQ7 101 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 ASB10Q8WXI3 467 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 ARHGAP5-AS1Q96IT6 56 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 LPAR2Q9HBW0 351 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 LIPT2A6NK58 231 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 EVX1P49640 407 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 C19orf48Q6RUI8 117 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 KCNRGQ8N5I3 272 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 DRAXINQ8NBI3 349 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-201ENST00000223398 DTX4Q9Y2E6 619 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 NUDT19A8MXV4 375 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 SLC51BQ86UW2 128 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 GLRX2Q9NS18 164 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 TMPRSS2O15393 492 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 ZFPL1O95159 310 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 DBPQ10586 325 aaPredicted RBP16.39■□□□□ 0.21
CLIP2-201ENST00000223398 BTNL3Q6UXE8 466 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 ADGRG3Q86Y34 549 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 OR52N4Q8NGI2 321 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 GON7Q9BXV9 100 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 AMDHD2Q9Y303 409 aa16.39■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF705GA8MUZ8 300 aaPredicted RBP16.38■□□□□ 0.21
CLIP2-201ENST00000223398 OR6X1Q8NH79 312 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 MRGPRDQ8TDS7 321 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 YIPF5Q969M3 257 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 TTTY12Q9BZ98 90 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 WDR54Q9H977 334 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 AK3Q9UIJ7 227 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 SERPINE3A8MV23 424 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 OR4E1P0C645 316 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 MCCD1P59942 119 aaPredicted RBP16.38■□□□□ 0.21
CLIP2-201ENST00000223398 LOXL4Q96JB6 756 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 ADGRL4Q9HBW9 690 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 PILRBQ9UKJ0 227 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 CABIN1Q9Y6J0 2220 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 PNLIPP16233 465 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 PTGFRP43088 359 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 MLF1P58340 268 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 CD276Q5ZPR3 534 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 C6orf201Q7Z4U5 140 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 ARHGEF39Q8N4T4 335 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 OR5H6Q8NGV6 325 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 TUBG2Q9NRH3 451 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 TMEM74BQ9NUR3 256 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 FCGR3BO75015 233 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 H2AFB1P0C5Y9 115 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 CT45A10P0DMU9 189 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 SP6Q3SY56 376 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 PXT1Q8NFP0 134 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 OR4C16Q8NGL9 310 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF75AQ96N20 296 aa16.38■□□□□ 0.21
CLIP2-201ENST00000223398 MASP2O00187 686 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 RBP4P02753 201 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 CBR1P16152 277 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 CD96P40200 585 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 ERRFI1Q9UJM3 462 aaPredicted RBP16.37■□□□□ 0.21
CLIP2-201ENST00000223398 LIMK1P53667 647 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 SVBPQ8N300 66 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 OR52B4Q8NGK2 314 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 PIK3IP1Q96FE7 263 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 FBXO8Q9NRD0 319 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 B4E171 279 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 TSPAN7P41732 249 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 C20orf24Q9BUV8 137 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 CXXC4Q9H2H0 198 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 OCEL1Q9H607 264 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 NTMQ9P121 344 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 SKP2Q13309 424 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 Q56UQ5 140 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 TMEM123Q8N131 208 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 NIPSNAP3BQ9BS92 247 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 ZNF835Q9Y2P0 537 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 SLC25A6P12236 298 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 Q3ZCU0 254 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 TINAGQ9UJW2 476 aa16.37■□□□□ 0.21
CLIP2-201ENST00000223398 A0A1W2PQD3 144 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 XRCC3O43542 346 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 LIFP15018 202 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 MOGAT3Q86VF5 341 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 TRAV1-2A0A0B4J238 106 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 ATG4DQ86TL0 474 aaPredicted RBP16.36■□□□□ 0.21
CLIP2-201ENST00000223398 YIPF6Q96EC8 236 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 PATZ1Q9HBE1 687 aaKnown RBP16.36■□□□□ 0.21
CLIP2-201ENST00000223398 HES4Q9HCC6 221 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 CLEC18AA5D8T8 446 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 FAM122CQ6P4D5 195 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 NUFIP2Q7Z417 695 aaKnown RBP16.36■□□□□ 0.21
CLIP2-201ENST00000223398 CLEC18CQ8NCF0 446 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 OR2M3Q8NG83 312 aa16.36■□□□□ 0.21
CLIP2-201ENST00000223398 TVP23CQ96ET8 276 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms