RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 TO15178 435 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 HNF1AP20823 631 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 C21orf58P58505 322 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 AANATQ16613 207 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 Q7L0L9 218 aa12.12□□□□□ -0.47
SF3A1-201ENST00000215793 SPRY3O43610 288 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MPGP29372 298 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 PCBP3P57721 371 aaKnown RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 AMER3Q8N944 861 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 FCER1GP30273 86 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 YBX1P67809 324 aaKnown RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 OR5I1Q13606 314 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 VN1R4Q7Z5H5 301 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 SPICQ8N5J4 248 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MOB3AQ96BX8 217 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MT-CO3P00414 261 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 STUMQ69YW2 141 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 LRRTM1Q86UE6 522 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 OR2Z1Q8NG97 314 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MCHR2Q969V1 340 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ZG16BQ96DA0 208 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 RAB5AP20339 215 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 SRD5A2P31213 254 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 MDH2P40926 338 aaKnown RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 HTRA4P83105 476 aaPredicted RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 PRR27Q6MZM9 219 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 COX14Q96I36 57 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF275Q9NSD4 429 aaPredicted RBP12.11□□□□□ -0.47
SF3A1-201ENST00000215793 ARID1AO14497 2285 aa12.11□□□□□ -0.47
SF3A1-201ENST00000215793 RNASEK-C17orf49H0YIS7 233 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PDCD6O75340 191 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF32P17041 273 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 DHRS2Q13268 280 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SSPNQ14714 243 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 TSPAN32Q96QS1 320 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
SF3A1-201ENST00000215793 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SFT2D2O95562 160 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 GPANK1O95872 356 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 CD96P40200 585 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SP6Q3SY56 376 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 TMEM215Q68D42 235 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 OR2T2Q6IF00 324 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 KLHDC1Q8N7A1 406 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 OR5M9Q8NGP3 310 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SARGQ9BW04 601 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 OR5V1Q9UGF6 321 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 CTAG2O75638 210 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PRSS41Q7RTY9 318 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 MOB3BQ86TA1 216 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-201ENST00000215793 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-201ENST00000215793 TOX3O15405 576 aaPredicted RBP12.1□□□□□ -0.47
SF3A1-201ENST00000215793 APC2O95996 2303 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 WNT1P04628 370 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SPNP16150 400 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 SSX1Q16384 188 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 PABPC1L2AQ5JQF8 200 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 TMEM88Q6PEY1 159 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
SF3A1-201ENST00000215793 MPLP40238 635 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 CDKN2AP42771 156 aaKnown RBP12.09□□□□□ -0.47
SF3A1-201ENST00000215793 FZD5Q13467 585 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 GUK1Q16774 197 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF768Q9H5H4 540 aaKnown RBP12.09□□□□□ -0.47
SF3A1-201ENST00000215793 KLK10O43240 276 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 HSBP1O75506 76 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 RAB7AP51149 207 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 SLC37A1P57057 533 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 NXPH1P58417 271 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 EID2BQ96D98 161 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 NEIL1Q96FI4 390 aaPredicted RBP12.09□□□□□ -0.47
SF3A1-201ENST00000215793 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 LRP5O75197 1615 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 DRD3P35462 400 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 ZIC1Q15915 447 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF425Q6IV72 752 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 ZNF774Q6NX45 483 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 SLC24A4Q8NFF2 622 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
SF3A1-201ENST00000215793 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
SF3A1-201ENST00000215793 OR5B21A6NL26 309 aa12.09□□□□□ -0.47
SF3A1-201ENST00000215793 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms