RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CCNOP22674 350 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 WNT5AP41221 380 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 PDZK1IP1Q13113 114 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 RSU1Q15404 277 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 GABRA6Q16445 453 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 INO80CQ6PI98 192 aaPredicted RBP12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 IDO2Q6ZQW0 420 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 FTMTQ8N4E7 242 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC30A7Q8NEW0 376 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 Q8NFD4 153 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 OR4S1Q8NGB4 309 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 OR5L1Q8NGL2 311 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 OR5M9Q8NGP3 310 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 PECRQ9BY49 303 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 BEX1Q9HBH7 125 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 PLSCR4Q9NRQ2 329 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 MED12LQ86YW9 2145 aa12.35□□□□□ -0.43
RTFDC1-201ENST00000023939 PQLC2LA1A4F0 135 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MBD3L4A6NDZ8 208 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MBD3L3A6NE82 208 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MBD3L5A6NJ08 208 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 NGFP01138 241 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CRHP06850 196 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CXCL3P19876 107 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 PTGER4P35408 488 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 PRSS12P56730 875 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 VAX1Q5SQQ9 334 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 SAXO1Q8IYX7 474 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 GVQW1Q8N7I0 195 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MBD3L2Q8NHZ7 208 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CCDC107Q8WV48 283 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 DACT3Q96B18 629 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 SEC22CQ9BRL7 303 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CEP250Q9BV73 2442 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MKRN2OSH3BPM6 223 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CSTBP04080 98 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 FCER2P06734 321 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 SDHBP21912 280 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 MRPS15P82914 257 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 FOXC1Q12948 553 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 PRDX4Q13162 271 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 TBC1D28Q2M2D7 210 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 HOGA1Q86XE5 327 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 OR13C8Q8NGS7 320 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 SNAPC3Q92966 411 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 FBXW5Q969U6 566 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 GPR137Q96N19 417 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 EIF3KQ9UBQ5 218 aaKnown RBP12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
RTFDC1-201ENST00000023939 IGKV1-12A0A0C4DH73 117 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 TMEM82A0PJX8 343 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 CD300LBA8K4G0 201 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 SPRY1O43609 319 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 ANGPTL7O43827 346 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 HTR3BO95264 441 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 IGKV1D-12P01611 117 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 RLN1P04808 185 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 CXADRP78310 365 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 MRPL49Q13405 166 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 EIF2S3LQ2VIR3 472 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 OR52W1Q6IF63 320 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 TMEM200AQ86VY9 491 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 ZDHHC23Q8IYP9 409 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 ZDHHC22Q8N966 263 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 OR4K15Q8NH41 348 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 ZFAND1Q8TCF1 268 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 PAPOLGQ9BWT3 736 aaKnown RBP12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 RANBP3Q9H6Z4 567 aaPredicted RBP12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 ZNF222Q9UK12 451 aa12.33□□□□□ -0.44
RTFDC1-201ENST00000023939 UBE2QL1A1L167 161 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 FAM172BPA6NC97 362 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 FIGNL2A6NMB9 653 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 RGS13O14921 159 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 FABP7O15540 132 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 WDR1O75083 606 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 TNFSF13O75888 250 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 CGAP01215 116 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 CBR1P16152 277 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 HRH1P35367 487 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 ARFRP1Q13795 201 aa12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 HLXQ14774 488 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-201ENST00000023939 CDK10Q15131 360 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms