RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 TLNRD1Q9H1K6 362 aa6.23□□□□□ -1.41
PHGDH-217ENST00000641455 PPP1R3EQ9H7J1 279 aa6.23□□□□□ -1.41
PHGDH-217ENST00000641455 CYB5R1Q9UHQ9 305 aa6.23□□□□□ -1.41
PHGDH-217ENST00000641455 LRP12Q9Y561 859 aa6.23□□□□□ -1.41
PHGDH-217ENST00000641455 HERC2O95714 4834 aa6.23□□□□□ -1.41
PHGDH-217ENST00000641455 TMEM210A6NLX4 147 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 CCL24O00175 119 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ANGPT2O15123 496 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SLC22A2O15244 555 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 IFNA14P01570 189 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ANXA2P07355 339 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SNRNP70P08621 437 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 FRMD6-AS1P0C7T7 363 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 PGA5P0DJD9 388 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 PSG2P11465 335 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SLC6A1P30531 599 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 RPS27P42677 84 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 OR3A4PP47883 348 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 CBX1P83916 185 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SEC23BQ15437 767 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ZNF260Q3ZCT1 412 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 LDLRAD2Q5SZI1 272 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ZNF770Q6IQ21 691 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 PLBD1Q6P4A8 553 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 TBPL2Q6SJ96 375 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 LHFPL2Q6ZUX7 228 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 MBOAT2Q6ZWT7 520 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 THAP5Q7Z6K1 395 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ZNF695Q8IW36 515 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 OFCC1Q8IZS5 231 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 C11orf42Q8N5U0 333 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ZBTB9Q96C00 473 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 REEP6Q96HR9 211 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 FAM46AQ96IP4 442 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 RNF170Q96K19 258 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 FN3KQ9H479 309 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 KAT8Q9H7Z6 458 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SSU72Q9NP77 194 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 NRIP3Q9NQ35 241 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 RPRD1BQ9NQG5 326 aaKnown RBP6.22□□□□□ -1.41
PHGDH-217ENST00000641455 CENPMQ9NSP4 180 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 ZFP57Q9NU63 452 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 VNN3Q9NY84 501 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 RHBDD3Q9Y3P4 386 aa6.22□□□□□ -1.41
PHGDH-217ENST00000641455 SORL1Q92673 2214 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 A0A087WUU8 490 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 ZNF850A8MQ14 1090 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 J3KTA2 159 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 SLC1A7O00341 560 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 BRS3P32247 399 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 MRPL19P49406 292 aaKnown RBP6.21□□□□□ -1.42
PHGDH-217ENST00000641455 VSNL1P62760 191 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 FAM3AP98173 230 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 PRDX4Q13162 271 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 IL18R1Q13478 541 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 DEFB136Q30KP8 78 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 CYBRD1Q53TN4 286 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 MINOS1Q5TGZ0 78 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 WDR93Q6P2C0 686 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 EPGNQ6UW88 154 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 DPY19L2P2Q6ZN68 376 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 ZDHHC21Q8IVQ6 265 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 RNF113BQ8IZP6 322 aaKnown RBP6.21□□□□□ -1.42
PHGDH-217ENST00000641455 FTMTQ8N4E7 242 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 CSNK2A3Q8NEV1 391 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 OR4Q3Q8NH05 313 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 OR4K13Q8NH42 304 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 SDSLQ96GA7 329 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 RSRC1Q96IZ7 334 aaKnown RBP6.21□□□□□ -1.42
PHGDH-217ENST00000641455 ERMAPQ96PL5 475 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-217ENST00000641455 NMNAT3Q96T66 252 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 TMEM109Q9BVC6 243 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 TMEM120AQ9BXJ8 343 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 SP140LQ9H930 580 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 EDA2RQ9HAV5 297 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 KCNG2Q9UJ96 466 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 ZNF222Q9UK12 451 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 TMEM5Q9Y2B1 443 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 MINOS1-NBL1R4GNA1 71 aa6.21□□□□□ -1.42
PHGDH-217ENST00000641455 hCG_38984A0A1B0GV85 526 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 TVP23AA6NH52 213 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 RFPL4AA6NLU0 287 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 C17orf98A8MV24 154 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 RFPL4AL1F8VTS6 287 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 PTP4A3O75365 173 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 OR2F2O95006 317 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 SPARCP09486 303 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 IGHV1-8P0DP01 117 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 NOS3P29474 1203 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 CX3CR1P49238 355 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 GSK3AP49840 483 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 ARHGDIBP52566 201 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 ACTA2P62736 377 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 ACTG2P63267 376 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 ACTC1P68032 377 aa6.2□□□□□ -1.42
PHGDH-217ENST00000641455 ACTA1P68133 377 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms